Rhinichthys klamathensis goyatoka (western speckled dace): 130078107
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Entry
130078107 CDS
T09701
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04150
mTOR signaling pathway
rkg04310
Wnt signaling pathway
rkg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130078107 (lrp5)
04150 mTOR signaling pathway
130078107 (lrp5)
09133 Signaling molecules and interaction
04519 Cadherin signaling
130078107 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130078107 (lrp5)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130078107 (lrp5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
LRP1-like_beta_prop
EGF_LRP2
SGL
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
130078107
NCBI-ProteinID:
XP_056099583
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MTILEDKLPHIFGFTLLGEYIYWTDWQRRSIERVHIANTTREVIVEQLPDLMGLKATKVT
ETSGTNGCAENNGGCSHLCFHRPQGLTCACPMGLELLSDLQTCVVPEAFLLFTNRADIRS
ISLGTNSNDVPIPLTGVKEASALDFDVLENRIYWTDVSTKTISRAFMNGSLVEPVIEFGL
DYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPANGYMYW
TEWGGRPRIARAHMDGSNIVTLVDKVGRANGLTIDYIDQRLYWTDLDTCMIESTNMQGLQ
REIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLEYVMDILVFHS
SRQDGANECSQNNSQCAHLCLASPSGAQCRCASHYILEANGRNCSSPSSFLLFSQKSSIS
RMVLGEQSPDMILPIHVMKNLRAISFDPLERLVYWVDGRQNIRRARDDGTQTSTVMTPTG
LHPKQPHDLSLDSYSRTVYWTCESTNTINIHRMDGHVIGEVLKDDVDKPRAIVVNAEKGY
MYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIESSD
LSGANRIVLQDSNILQPVGLTVLGDHLYWIDKQQQMIERVDKLTGEKRTRIQGRLQYLTS
IHAVEYMEPEEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQNLLSCGEPPTCS
SEQFTCATGEIDCIPMAWRCDGIAECADHSDEMNCPICSELQFQCDKGQCVDSQLRCNGE
PDCADGSDELDCDTICMPNQFRCGNNQCILKKQQCDSFADCTDKSDELFCDFPPPPNDLP
RHTSTIGPVIGIILSVFVMGGMCFVCQRVVCRHYKGPNGGFPHEYISGTPHVPLNFIAPT
NSQHGTFTGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQMLNP
PPSPATDRSLYNAEVFYSSNSPSTTRSYRPYLKRGVAPPTTPCSTDVCDSDYTTSRWKSN
KYYMDLNSDSDPYPPPPTPRTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctagaggacaaactacctcatatctttggttttacgctgttgggcgagtat
atctactggactgactggcagcggaggagcattgaaagagttcacattgccaacaccacc
cgtgaggtcatcgtcgagcaacttcctgacctcatgggtctcaaagccacaaaagtcaca
gagacctctggcactaacggctgtgcggaaaacaacggcggctgcagtcacctgtgcttc
catcggcctcagggtctgacctgcgcctgccccatgggcctggagttgctgagtgacctg
cagacttgtgtggttccagaagctttcttgctcttcaccaaccgcgctgacatacgcagc
atctctctgggcaccaacagcaatgatgtgcccatcccgctcaccggggtgaaggaggcc
tccgcactggactttgatgttttagaaaataggatctactggaccgacgtcagcaccaag
actatcagcagagccttcatgaatggcagtttggttgaaccagtcattgagtttggcctg
gactaccctgagggaatggctgtggactggatgggtcgaaacctctactgggcggatacc
ggcaccaaccgaattgaagtggcccgtctggacggccagtaccgacaagtgctggtctgc
aaagacctggataaccctcgttctcttgctctggaccctgccaatgggtacatgtactgg
actgaatggggaggtcgtcccaggatagcccgcgctcacatggacggtagtaacatcgtg
actttagtagacaaagtgggccgagccaacgggcttacgattgactacatcgaccagcgg
ctctactggacagacctggacacctgcatgattgagtctacaaacatgcaaggtttgcag
agggagatagtggccgacgatcttcctcatccttttggcttgacccagtatcgcgactac
atctactggaccgactggaacctgcgcagtattgagcgggcggacaagcgcagtggcttg
aaccgaaccgtggtgcaggggcacctggagtatgtcatggacatcctggttttccactcc
tctagacaagatggcgccaacgagtgttcgcagaacaacagccagtgcgcccacctctgc
ctagcatccccctctggagcccagtgccgctgcgcttcccactacatcctggaggcaaac
ggacgcaactgcagctcgccctctagcttcctgctcttcagccagaagagctctatcagt
cgaatggtactgggagaacagagtccagacatgattctaccaatccacgttatgaagaac
ttgcgtgccatcagctttgaccctttggaacgcctggtctactgggtggatggccgacaa
aacatccgcagggcccgggatgatggcactcagacctccacggtgatgaccccaaccggt
cttcacccgaagcagcctcatgacctgagtctggactcctacagtcgcaccgtctactgg
acctgcgagagcaccaacaccatcaacatccatcgcatggacggccacgttatcggagag
gtcctgaaggatgatgtggacaagccacgtgctattgtggtgaacgctgagaaaggctac
atgtatttcactactgtccaggatcgttcggctaaaatcgaaggtgcgtctttggatggg
acggagcgtgaatccctcttcacgaccggtttgatccgccccgtggcactggctttggac
aacaagctgggcaagctgttctgggtggatgcagacctgaaacggattgagagcagtgac
ctgtctggggccaatcggatcgttcttcaggactccaacatccttcagcctgtcggtctg
acagtgctgggagatcacctgtactggatcgacaaacagcagcagatgatcgagcgtgtg
gacaagctgaccggagagaagaggacccgcattcaggggcgactccagtacctgaccagc
atccatgcggtggagtacatggaaccagaggagtttgcatcccacccttgttcccgtgat
aacggaggctgctcccacatctgcatcgctaagggcgacgggacgccacgctgctcttgt
cccatgcacctggtgctgcttcaaaatctactcagctgtggagagcctcccacgtgctct
agcgagcagttcacctgtgctactggtgagatcgactgcatccctatggcgtggcgctgc
gacggcatcgccgagtgcgcagaccacagcgatgagatgaactgccccatctgctccgaa
ctccagttccagtgcgacaaaggccagtgcgtggactctcagctgcgctgcaacggagag
ccagactgcgcagacggctctgatgaactggattgcgacaccatttgtatgcctaatcag
ttccgttgtggcaacaaccagtgtatcctgaagaaacagcagtgtgactccttcgcagac
tgcacagacaaatctgatgagcttttctgtgatttccctccgccccccaacgaccttccg
cgtcacaccagcaccatcggccccgtcatcggcatcatcctctctgtctttgtgatggga
ggcatgtgttttgtgtgtcagagagtcgtgtgtcgccattacaagggccccaatggaggc
tttccacacgagtacatcagcgggaccccacacgtgcccctcaactttatcgcacccaca
aactcacagcacggtacttttacaggtatttcctgtgggaagtccatgatgagttcagtg
agtctcatgggcagcagcagcagtggggcgcctctctacgacagaaaccatgtgacagga
gcttcatccagtagctcttccagcacaaaaggagctttctatccgcagatgctcaaccct
cctccatcaccagcaacagatcgctccctttacaacgcagaagtcttctattcgtccaac
agcccttccacaaccaggtcttacaggccatatttgaagcgaggggtcgcgccccccacc
acaccctgcagcacagacgtgtgtgacagtgactacaccaccagccgctggaaaagcaat
aagtactacatggacctcaattcagactctgacccctaccctccgccccccacgccccgc
acgccccgcagccagtacatgtcagcggaggagagctgccctccctcgccctccactgag
cgcagctacttccacctgtgccccccgcccccctcgccctgcacagactcctcatga
DBGET
integrated database retrieval system
