Rhinichthys klamathensis goyatoka (western speckled dace): 130078107
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Entry
130078107 CDS
T09701
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04150
mTOR signaling pathway
rkg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130078107 (lrp5)
04150 mTOR signaling pathway
130078107 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130078107 (lrp5)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130078107 (lrp5)
BRITE hierarchy
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
DUF5050
SGL
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
130078107
NCBI-ProteinID:
XP_056099583
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MTILEDKLPHIFGFTLLGEYIYWTDWQRRSIERVHIANTTREVIVEQLPDLMGLKATKVT
ETSGTNGCAENNGGCSHLCFHRPQGLTCACPMGLELLSDLQTCVVPEAFLLFTNRADIRS
ISLGTNSNDVPIPLTGVKEASALDFDVLENRIYWTDVSTKTISRAFMNGSLVEPVIEFGL
DYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPANGYMYW
TEWGGRPRIARAHMDGSNIVTLVDKVGRANGLTIDYIDQRLYWTDLDTCMIESTNMQGLQ
REIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLEYVMDILVFHS
SRQDGANECSQNNSQCAHLCLASPSGAQCRCASHYILEANGRNCSSPSSFLLFSQKSSIS
RMVLGEQSPDMILPIHVMKNLRAISFDPLERLVYWVDGRQNIRRARDDGTQTSTVMTPTG
LHPKQPHDLSLDSYSRTVYWTCESTNTINIHRMDGHVIGEVLKDDVDKPRAIVVNAEKGY
MYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIESSD
LSGANRIVLQDSNILQPVGLTVLGDHLYWIDKQQQMIERVDKLTGEKRTRIQGRLQYLTS
IHAVEYMEPEEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQNLLSCGEPPTCS
SEQFTCATGEIDCIPMAWRCDGIAECADHSDEMNCPICSELQFQCDKGQCVDSQLRCNGE
PDCADGSDELDCDTICMPNQFRCGNNQCILKKQQCDSFADCTDKSDELFCDFPPPPNDLP
RHTSTIGPVIGIILSVFVMGGMCFVCQRVVCRHYKGPNGGFPHEYISGTPHVPLNFIAPT
NSQHGTFTGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQMLNP
PPSPATDRSLYNAEVFYSSNSPSTTRSYRPYLKRGVAPPTTPCSTDVCDSDYTTSRWKSN
KYYMDLNSDSDPYPPPPTPRTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctagaggacaaactacctcatatctttggttttacgctgttgggcgagtat
atctactggactgactggcagcggaggagcattgaaagagttcacattgccaacaccacc
cgtgaggtcatcgtcgagcaacttcctgacctcatgggtctcaaagccacaaaagtcaca
gagacctctggcactaacggctgtgcggaaaacaacggcggctgcagtcacctgtgcttc
catcggcctcagggtctgacctgcgcctgccccatgggcctggagttgctgagtgacctg
cagacttgtgtggttccagaagctttcttgctcttcaccaaccgcgctgacatacgcagc
atctctctgggcaccaacagcaatgatgtgcccatcccgctcaccggggtgaaggaggcc
tccgcactggactttgatgttttagaaaataggatctactggaccgacgtcagcaccaag
actatcagcagagccttcatgaatggcagtttggttgaaccagtcattgagtttggcctg
gactaccctgagggaatggctgtggactggatgggtcgaaacctctactgggcggatacc
ggcaccaaccgaattgaagtggcccgtctggacggccagtaccgacaagtgctggtctgc
aaagacctggataaccctcgttctcttgctctggaccctgccaatgggtacatgtactgg
actgaatggggaggtcgtcccaggatagcccgcgctcacatggacggtagtaacatcgtg
actttagtagacaaagtgggccgagccaacgggcttacgattgactacatcgaccagcgg
ctctactggacagacctggacacctgcatgattgagtctacaaacatgcaaggtttgcag
agggagatagtggccgacgatcttcctcatccttttggcttgacccagtatcgcgactac
atctactggaccgactggaacctgcgcagtattgagcgggcggacaagcgcagtggcttg
aaccgaaccgtggtgcaggggcacctggagtatgtcatggacatcctggttttccactcc
tctagacaagatggcgccaacgagtgttcgcagaacaacagccagtgcgcccacctctgc
ctagcatccccctctggagcccagtgccgctgcgcttcccactacatcctggaggcaaac
ggacgcaactgcagctcgccctctagcttcctgctcttcagccagaagagctctatcagt
cgaatggtactgggagaacagagtccagacatgattctaccaatccacgttatgaagaac
ttgcgtgccatcagctttgaccctttggaacgcctggtctactgggtggatggccgacaa
aacatccgcagggcccgggatgatggcactcagacctccacggtgatgaccccaaccggt
cttcacccgaagcagcctcatgacctgagtctggactcctacagtcgcaccgtctactgg
acctgcgagagcaccaacaccatcaacatccatcgcatggacggccacgttatcggagag
gtcctgaaggatgatgtggacaagccacgtgctattgtggtgaacgctgagaaaggctac
atgtatttcactactgtccaggatcgttcggctaaaatcgaaggtgcgtctttggatggg
acggagcgtgaatccctcttcacgaccggtttgatccgccccgtggcactggctttggac
aacaagctgggcaagctgttctgggtggatgcagacctgaaacggattgagagcagtgac
ctgtctggggccaatcggatcgttcttcaggactccaacatccttcagcctgtcggtctg
acagtgctgggagatcacctgtactggatcgacaaacagcagcagatgatcgagcgtgtg
gacaagctgaccggagagaagaggacccgcattcaggggcgactccagtacctgaccagc
atccatgcggtggagtacatggaaccagaggagtttgcatcccacccttgttcccgtgat
aacggaggctgctcccacatctgcatcgctaagggcgacgggacgccacgctgctcttgt
cccatgcacctggtgctgcttcaaaatctactcagctgtggagagcctcccacgtgctct
agcgagcagttcacctgtgctactggtgagatcgactgcatccctatggcgtggcgctgc
gacggcatcgccgagtgcgcagaccacagcgatgagatgaactgccccatctgctccgaa
ctccagttccagtgcgacaaaggccagtgcgtggactctcagctgcgctgcaacggagag
ccagactgcgcagacggctctgatgaactggattgcgacaccatttgtatgcctaatcag
ttccgttgtggcaacaaccagtgtatcctgaagaaacagcagtgtgactccttcgcagac
tgcacagacaaatctgatgagcttttctgtgatttccctccgccccccaacgaccttccg
cgtcacaccagcaccatcggccccgtcatcggcatcatcctctctgtctttgtgatggga
ggcatgtgttttgtgtgtcagagagtcgtgtgtcgccattacaagggccccaatggaggc
tttccacacgagtacatcagcgggaccccacacgtgcccctcaactttatcgcacccaca
aactcacagcacggtacttttacaggtatttcctgtgggaagtccatgatgagttcagtg
agtctcatgggcagcagcagcagtggggcgcctctctacgacagaaaccatgtgacagga
gcttcatccagtagctcttccagcacaaaaggagctttctatccgcagatgctcaaccct
cctccatcaccagcaacagatcgctccctttacaacgcagaagtcttctattcgtccaac
agcccttccacaaccaggtcttacaggccatatttgaagcgaggggtcgcgccccccacc
acaccctgcagcacagacgtgtgtgacagtgactacaccaccagccgctggaaaagcaat
aagtactacatggacctcaattcagactctgacccctaccctccgccccccacgccccgc
acgccccgcagccagtacatgtcagcggaggagagctgccctccctcgccctccactgag
cgcagctacttccacctgtgccccccgcccccctcgccctgcacagactcctcatga
DBGET
integrated database retrieval system
