Rhinichthys klamathensis goyatoka (western speckled dace): 130079424
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Entry
130079424 CDS
T09701
Symbol
ftr82
Name
(RefSeq) finTRIM family, member 82
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130079424 (ftr82)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130079424 (ftr82)
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
ALS2CR8
DAHL
DUF4303
DUF4407
EzrA
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130079424
NCBI-ProteinID:
XP_056100666
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MAEQLSSDYFSCPLCTELLRDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCQITFTQ
RPVLRPNATLTKVAEKIKKTGLNLTSPSNGIYAGPGDVPCDFCSGKNFKAVKSCLNCLAS
YCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKSLELFCRTDQMCICALCTVSEHK
GHDIVSAEAERSEKQKLLGVSQAEIKQKCQQRTKELEELKTAVDSLKSSAQRAMTESKKM
FDEMITSIERMRSEVTKLININERAAFSQAEGLMERLEQEIEELKKKESGLKQLYSTDDH
IHFLQNFNYLCTPTDDGFIPRVSLNPDFSFSAARKAVAEIKEKLEELGRDELRKISKSVN
DVPVYTVENRTKEKSTRVKEVHTVDSSPPTEPRTRSEFLKYYCQLRLDPHTAHKELFLSE
GNRKVIRTRDLQPYSETQDRFDSFAQVLCREALSGGRFYWEIEWSGEFSIGVAYRGISRK
GKGSLCLLGYNDKSWSLLCSDTGYSAWHNRVDKAVSGPHSSRIGVFLDHSAGVLAFYSIG
ETMTRLYRFETTFTEPIYPGFGVGTSVKICQLK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaactgtcttcagattacttcagctgccctctatgtacggagctcctgagg
gaccctgtggcgatcccgtgtggtcacagcttctgcatggactgtatcagcggctactgg
aatgaggctgattacactggcatctacatctgtccccagtgtcagatcacgttcacccag
agacccgtgctgaggccaaacgccactctcaccaaagttgcggagaagattaagaagact
ggcttaaacttaacgtctcctagtaatggaatctatgctggccccggggatgttccttgc
gacttctgcagtggaaagaatttcaaggcggtcaagtcctgcctcaactgtcttgcctct
tactgcgaaaagcacctgaagccccactatgagtccgccacattcaagaggcacaagctg
gtggatgagctggggaacctggaccgtaagatctgccctcagcaccagaagagcctagag
ttgttctgtcgtacagaccagatgtgtatttgtgctctctgtactgtaagcgagcacaag
ggtcatgacatagtctcagccgaagcagaaaggagtgaaaaacagaaacttcttggagtg
tcccaggcggagatcaaacaaaaatgccagcagagaaccaaagaactggaggagctgaag
acagcagtggattccctaaaaagctctgcacaaagagcaatgaccgaaagcaagaagatg
tttgatgagatgatcacctccattgagaggatgaggtcagaggtcaccaaactgatcaac
atcaatgagagggctgcattcagtcaggcagagggactgatggagcgactggagcaggag
attgaagaactgaagaagaaagagagtggacttaaacagctttatagcactgatgatcac
attcacttcttacagaatttcaattatctctgcaccccaactgatgacggcttcataccc
agagtgtctctgaatccggacttttccttcagtgcagccaggaaggccgtggctgagatc
aaagagaagctggaggagctgggcagagatgaactgcgcaaaatctcaaaatcagtgaac
gacgtaccagtgtacactgtggagaatcgcaccaaggagaaaagtaccagagttaaagaa
gttcatacagtggacagttcacctcctacagaacccaggacaagatctgaatttctgaaa
tactactgtcagctgagactagacccccacacggcgcataaggagctgttcttatctgaa
ggaaacagaaaggtgattagaacccgagacctgcagccatactcagaaacccaagatcgc
ttcgatagctttgcccaggtgctgtgtcgtgaggctctgtcaggtggccgtttctactgg
gaaatcgagtggagtggagaattctcgattggagtggcctatcggggcattagccgtaag
ggtaaaggctccctgtgcttgctgggctacaacgataagtcttggagcctcctctgctct
gacacagggtactcggcctggcataacagggtagacaaggctgttagtggccctcactct
tcgagaataggggtcttcctggaccactctgcaggggtgttggccttctacagtattggt
gagactatgacacgtctctatcgtttcgagaccacatttactgagcccatttatcctggg
tttggggttggaacgtcagtcaagatctgtcaattaaaatga
DBGET
integrated database retrieval system
