Rhinichthys klamathensis goyatoka (western speckled dace): 130079552
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Entry
130079552 CDS
T09701
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130079552 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130079552 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130079552 (usp13)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130079552 (usp13)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130079552 (usp13)
Ubiquitin system [BR:
rkg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130079552 (usp13)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130079552 (usp13)
BRITE hierarchy
Motif
Pfam:
zf-UBP_var
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
130079552
NCBI-ProteinID:
XP_056100827
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCLNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKQKATGAAGGAIPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAILNAQSPYKKQESDSWEEEIQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALDHYKETNFPLAVK
LNTITPDGADVYSFDEEEAVVDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQLRVSDWE
VIQEAGLKLKPVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PSQDFNTQMAKFGHGLLSGQYSKPPMKSELIEQVMKEEYKQLQRGISPKMFKALVSKGHP
EFSSNRQQDAHEFFLHLINLVEVRKCFSI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatctgggagagctactggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagtgaatgcgctttttcctacgactctcctgaatcggaa
ggaggtctatatgtgtgtttgaacacattcctgggatttggaagagaacacgtggagaga
cattaccgtaaaactggacagagtgtgtacatgcacttaaaacggcatgtgaaacagaaa
gccacaggtgctgcagggggtgccataccaagaagaaggaatggaaaagtatttttagat
ttagagcttaaccgtgattttaatggagatgattatgagtacgaagatgaagccaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggaattgcccgcactg
gtgacaatagcctgtgacgccatcctcaatgcacaatctccatacaaaaagcaggagtca
gattcatgggaagaggagatccaagtatctaaacatgcccgaagtctcagacagcaggag
aatggagttcgaattcctcccagcggctggaagtgcgccaagtgtgaaatgagagaaaac
ctgtggctaaacctgacggatggctctgtcctctgtgggaaatggttctttgatgggagc
ggagggaatggacatgcccttgatcactacaaagaaaccaacttccccctggcagtgaaa
ctcaacacaatcaccccagatggagcagatgtttattccttcgacgaagaagaagcagtg
gttgatcctcacatatcagaacatttgttacactttggaatagatatgctgcaaatgcaa
aggacagagaatggtcatcatacagacaaccacgtgcagctgcgcgtgagtgactgggaa
gtgattcaggaggctggtctaaagctaaagcccgtctatggctcaggatatacgggcatc
aaaaacctgggcaacagctgctacctgagcaccactatgcaagtgcttttcagtattcca
gagttccagagagcgtatgttgggaacctacagagaatatttgactactcgccccttgat
ccaagccaggatttcaacacacagatggcaaaatttggtcatggacttctctcaggccag
tactcaaaacctccaatgaaatcagaactaattgaacaggtgatgaaagaagaatacaag
cagctgcaacgagggatttcacctaagatgttcaaagcgctggtcagtaaaggacaccca
gagttttcctcaaaccggcaacaagacgctcacgaattcttcctgcatttaattaacctg
gtggaggtacgaaagtgtttttctatctaa
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