Rhinichthys klamathensis goyatoka (western speckled dace): 130085189
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Entry
130085189 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like protein isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130085189
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130085189
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_6
zf-RING_10
DUF5446
zf-RING_5
PHP
U-box
eIF3_subunit
DUF4239
Motif
Other DBs
NCBI-GeneID:
130085189
NCBI-ProteinID:
XP_056106785
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MAEARISQDEFMCSVCLDLLKDPVTIHCGHSYCKICITDCWDQEDEKSVYSCPQCRQTFS
PRPALGKNTILAELVEKLKKTKLPADCYAGAGDVECDVCTGRKHKAVKSCLVCQESYCQT
HFDRHEEYHSRKPHKVIDATGRLQDMICRKHDKELEMYCITDQQCICVWCKEYEHKNHNT
VSTAAQRTEKQKQLKETQMKIRQRIQQRQKDLHQLREAVKSHKRSAQTAVEDSERIFTEI
IRSIERSRSEVTQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIQFL
QSFQSLSAPPESTDEPDVPFGSLSSFDGMRESVRQLRDKLEDFCKEEIKKISDGVTFTNM
NPKTRNDFLQYSHQLTLDLNTVNKRLRLSERNRVITVTDTEQPYPDHPDRFECYPQVLCR
ESVCGRCYWEIEWTGDDVYISVSYKSISRKGSGDECFFGGNDQSWSLSCSSSSYTFWHNN
IHTPLPVKSISRRIGVCVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFWVDYGSSV
KLC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttctcaggatgagttcatgtgttcagtgtgtctggatctcctg
aaggatccagtgactatccactgtggacacagttactgtaagatctgtattacagactgc
tgggatcaggaggatgagaagagcgtctacagctgccctcagtgcagacagaccttcagt
ccaagacctgctttagggaaaaacaccattctggctgaactggtggagaaactgaagaag
actaaacttcctgctgactgttacgctggagctggagacgtggagtgtgacgtctgtact
ggaagaaaacacaaagccgtcaagtcctgtctggtgtgtcaggagtcttactgtcaaact
cattttgaccgtcatgaggaatatcactctcgtaagccacacaaagtgattgatgccact
ggacgactgcaggacatgatctgccgtaaacatgataaagagctagagatgtactgtatt
actgatcaacagtgcatctgtgtgtggtgtaaagagtatgaacataaaaaccacaacact
gtctcaactgcagcacagaggacagagaaacagaaacagctgaaggagacgcagatgaag
atccgtcagagaatccagcagagacagaaagatcttcatcagctgagagaggctgtgaag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagatc
atccgctccattgagagaagccgctctgaggtcacacagcggatcagagatcaggaaaag
actgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaagatcacatccagttcctg
cagagtttccagtctctctcagcacctcctgaatctacagacgaacccgacgttcccttc
ggttctctctcctcttttgatggcatgagagaatctgtccgtcagctgagagacaaactg
gaggatttctgcaaagaggagatcaagaagatctcagacggagtcactttcaccaacatg
aatcccaagaccaggaacgacttcctacaatattcccatcagctcactctggatctgaac
acagtgaataaacgcctccgtctgtctgagagaaacagagttattactgtcactgacaca
gagcagccgtatcctgatcatccagacagatttgagtgttatcctcaggtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagattgagtggactggagatgatgtgtatata
tcagtgtcatataagagcatcagcaggaagggatcgggtgatgagtgtttctttggaggt
aatgatcagtcctggagtttgtcctgctcttcctccagttacacattctggcacaataac
attcacactcctctccctgtaaagtccatcagcagaagaataggagtgtgtgtggatcac
agtgcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacacagtc
cagaccacattcactcagccgctctatcctgggttttgggttgattatggatcatcagtg
aaactgtgttga
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