Rhinichthys klamathensis goyatoka (western speckled dace): 130085753
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Entry
130085753 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130085753
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130085753
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_10
eIF3_subunit
U-box
PHP
Exonuc_VII_L
DUF5446
Sec10_N
Motif
Other DBs
NCBI-GeneID:
130085753
NCBI-ProteinID:
XP_056107682
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MAEARISVDQNEFMCSVCLDLLKDPVTILCGHSYCKICISGCWDQEDGKRVYSCPQCRQT
FSPRPALAKNTMLAEVEKLKKTKLPADCYAGAGDMECDVCTGRKHKAVKSCLVCQESYCQ
THFDRHEEFHSRKPHKVIDATGRLQDMICRKHDKELEMFCITDQECICVWCKEYEHKNHN
TVSTAAQRTEKQKQLKETQMKIRQRIQQRQKDLHQLREDVESHKRSAHTAVEDSEKIFTE
IIRSIERSLSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTHHHIQF
LQSFQSLSAPPESTDEPDVPFGSLSSFNGVRESVRQLRDKLEDFCKEEIKKISDGVTFTN
MNPKTRNDFLQYSHQLSLDLNTVNKCLRLSKRNRVITDTDRVQPYPDHPDRFDQWCQVLC
RESVCGRCYWEIEWSGRCVFISVSYKSISRKGQGIECVFGRNDQSWSLFCSSSRYSFWHN
KIETVLPVKSISRRIGVCVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFNVGYKSS
VKLC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttcagtggatcagaatgagttcatgtgttcagtgtgtctggat
ctcctgaaggatccagtgactatcctctgcggacacagttactgtaagatctgtatttct
ggctgctgggatcaggaggatgggaagagagtctacagctgccctcagtgcagacagacc
ttcagtccaagacctgctttagctaaaaacaccatgctagctgaagtggagaaactgaag
aagactaaacttcctgctgactgttacgctggagctggagacatggagtgtgacgtctgt
actggaagaaaacacaaagccgtcaagtcctgtctggtgtgtcaggagtcttactgtcaa
actcattttgaccgtcatgaggaatttcactctcgtaaaccacacaaagtgattgatgcc
actggacgactgcaggacatgatctgccgcaaacatgataaagagctagaaatgttctgt
atcactgatcaagaatgcatttgtgtgtggtgtaaggagtatgaacataaaaaccacaac
actgtatcaactgcagcgcagaggaccgagaaacagaaacagctgaaggagacgcagatg
aagatccgtcagagaatccagcagagacagaaagatcttcatcagctgagagaggatgtg
gagtctcataagcgctctgcacacacagcagtggaggacagtgagaagatattcactgag
atcatccgctccattgagagaagcctctctgaggcgacacagcggatcagagatcaggaa
aagactgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgat
ctgaggaggagagacgctgagctggagcagctttcacacacacaccatcacatccagttc
ctgcagagtttccagtctctctcagctcctcctgaatctacagacgaacccgacgttccc
ttcggttctctctcctcttttaatggcgtgagagagtctgtccgtcagctgagagacaaa
ctggaggatttctgcaaagaggagatcaagaagatctcagacggagtcacattcaccaac
atgaatcccaagaccaggaacgacttcctacaatattcccatcagctctctctggatctg
aacacagtgaataaatgcctccgtctgtctaagaggaacagagttattactgacactgac
agagtccagccgtatcctgatcatccagacagatttgatcagtggtgtcaggtgttgtgt
agagagagtgtgtgtggacgctgttactgggagattgagtggagtgggagatgtgtgttt
atatcagtgtcatataagagcatcagcaggaagggacagggtattgagtgtgtgtttgga
cgtaatgatcagtcgtggagtttgttctgctcttcctccagatactcattctggcacaat
aagatagagactgttctccctgtaaagtccatcagcagaagaataggagtgtgtgtggat
cacagtgcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacaca
gtccagaccacattcactcagccgctctatcctgggtttaatgttggttataaatcatca
gtgaaactgtgttaa
DBGET
integrated database retrieval system