Rhinichthys klamathensis goyatoka (western speckled dace): 130095039
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Entry
130095039 CDS
T09701
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03250
Viral life cycle - HIV-1
rkg04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130095039 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130095039 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130095039 (samhd1)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130095039 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
130095039
NCBI-ProteinID:
XP_056117662
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MRTCSGTARAFYFDGAESASQRHTALSVIICLAEHGITGPGLPYLTEGLLEKMGISPLGS
RLQILHCLQKLWKISNEPVKVFNDPIHGHIELHPLLVQFIDTPQFQRLRHIKQLGGTYLV
FPGASHNRFEHSVGVGYLAGCLVKALNERQPELFITKQDMLCVQIAGLCHDLGHGPFSHL
FDGMFIPKVRPGRKWKHETASVQMFDHLVEVNELEAVMVHHGLRLPEDLVFIKEQIAGPL
ETSVLDRSWPYKGRPLEKSFLYEIVANKRNGIDVDKWDYFARDCYHLGIQNNFDYQRFLK
FARVCEVRGKKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITEAFVKADPH
IQIQGSSGRMFTISSAIEDMEAYSKLTDNIFEQILYSSAPELSEARAILHNIVCRRLYKC
VGQTTSETHVDVSPEKLLDWAKEVARSKPSGTDGNLIAEDFVVSVIHMDYGMKEKNPINN
VHFYCKNDPSKAIKIRKKQVSKLLPEQFAEQLIRVFCKKTDDKSLEAAKKYFVQWCMDSN
FTKPQDGDVIAPELTPLKRDWHTLEQDDSDSEVDEGTRPGIRDQTPKKTGRSVKVNLFQA
QGESKL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacttgttcgggaaccgcgcgtgccttttacttcgacggcgctgagagcgccagc
cagagacacacagccctcagtgttattatctgtcttgcagagcatggcataacagggcca
ggactgccataccttaccgaggggcttttggagaagatgggtatttcgcctctgggatca
cgcctgcagatcctccactgccttcagaagctctggaaaatctctaacgaacccgtgaag
gtgttcaacgaccccatccacggccacatcgagctgcaccccctgctggtccagttcata
gacacgcctcagttccagaggcttcgccacatcaaacagctgggaggaacgtacctggtg
ttcccgggggcgtcccacaaccgcttcgagcattcggtcggggtggggtatttggcgggg
tgtctcgtcaaggctctgaacgaaagacagccagagctcttcataacgaagcaggacatg
ctgtgtgtgcagatcgccggcctgtgccatgacctgggtcatggcccattttctcatttg
tttgatggcatgttcatccctaaagttcgacctggtcggaagtggaagcacgagaccgcc
tcagtgcagatgttcgaccacctggtggaggtcaacgagctcgaggcggtgatggtgcat
catgggctgagacttccagaggacctggtcttcatcaaggagcagatcgccgggccgctg
gagacctcagtgctggaccgctcgtggccgtataagggccggcctctggagaagtccttc
ctgtacgagatcgtcgcaaacaaacgaaatggcatcgacgtggataagtgggactacttt
gctagggattgttaccacctggggatccagaataacttcgactatcagcgcttcctcaag
tttgcacgggtgtgtgaagtgagaggaaagaagcacatttgcacaagagacaaggaggtt
ggcaatctctacgacatgttccacactcgtaactgcctccatcgccgggcgtatcagcac
aaagtgggcaacatcatcgagaccatgataaccgaggcctttgtaaaggcggaccctcac
atccagatccagggctcttctggcaggatgttcacgatctcgtcagctatagaagacatg
gaggcctacagcaaactcacagataatatctttgaacagatcctgtactcgtctgcgccg
gagctgtccgaggcccgagccatcctgcacaacatcgtctgtagacggctgtacaagtgt
gtgggtcagaccacgtcggagacgcatgtggacgtgtcgccggaaaagctgcttgactgg
gcgaaggaagtggcccgatccaaacccagcggcacagatggcaacctcatagcggaggac
tttgtagttagtgtcattcacatggattatggaatgaaggagaaaaaccccatcaacaat
gtccatttttactgcaagaacgatcccagtaaagccatcaagatccgcaagaaacaggtg
tccaaactcctgccggagcagttcgctgagcagctgatcagggtcttctgtaagaagacg
gatgacaagagcctcgaagctgctaagaagtacttcgtccagtggtgcatggacagcaac
ttcactaaaccgcaggacggagatgtcatcgctccagagctcacgccactcaagcgagac
tggcacacgctggagcaggacgacagtgacagcgaggtagatgaaggcacgcgcccggga
attagagatcagacgcccaagaagacgggacgcagtgtaaaagtcaacctttttcaagct
cagggagaaagcaagctctga
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