Rhinichthys klamathensis goyatoka (western speckled dace): 130097435
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Entry
130097435 CDS
T09701
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130097435 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130097435 (pcgf5a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
130097435 (pcgf5a)
BRITE hierarchy
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-Nse
zf-RING_10
zf-RING_6
E3_UbLigase_R4
zf-rbx1
DUF3337
Etmic-2
TRAF3_RING
DUF678
zf-C3HC4_5
DUF1272
Motif
Other DBs
NCBI-GeneID:
130097435
NCBI-ProteinID:
XP_056120248
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MATHRKHLVRDFNRHITCSICHGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLREKEEQKESEFWRKNKIKANGEDGPRAKKAHLSD
EEDDDGKGGDYHRSDPQIAICLDCLRNNGQSGESTVKGLMKKFIRCSTRVTVGTIKKFLC
VKLKLPCSYELDVLCNGEIMGKDHTLEFIYRTRWRLQGDSAYPMVLEYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaccgaaagcacctggtccgagattttaaccgacacattacctgctcaatt
tgtcatggatacctgatcaagcccaccgctgtcacagaatgcctgcacactttttgtaag
agttgtatcgttcagcactttgaggagagtaatgagtgtccagaatgtgggatacaggtc
catgaaaccaaccctttagagatgctgagactagataaaaccctggaggagatcatcttc
aagctggtgcctggactaagagagaaggaggaacaaaaggaaagtgagttttggagaaaa
aataaaatcaaagcaaatggagaagatggccctagggctaagaaagctcacctgagtgat
gaagaggatgatgatgggaaaggtggagactaccacaggagtgatcctcagatcgctatt
tgtctggactgtctacgtaacaatggccaatcaggagaaagcacagttaagggtttaatg
aagaaattcatccgttgctccacccgtgttacggtgggaaccattaagaagttcctctgt
gtaaaattgaagctgccatgctcttatgagctcgacgttttgtgtaatggggagatcatg
ggcaaagaccacaccctggaattcatatatcgcactcgctggagacttcagggtgacagc
gcttatcccatggttctcgaataccgtccgaggattgactttggttaa
DBGET
integrated database retrieval system