Rhinichthys klamathensis goyatoka (western speckled dace): 130100749
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Entry
130100749 CDS
T09701
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130100749 (rpap1)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130100749 (rpap1)
BRITE hierarchy
Motif
Pfam:
RPAP1_C
RPAP1_N
PP2C_C
DUF3347
Motif
Other DBs
NCBI-GeneID:
130100749
NCBI-ProteinID:
XP_056122321
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MLRRPKSADSEADLLREQQELLAAGGQSTVTVVKRPDKRRGDAAGAHEQEKHRDVVTIED
LPDEIPTLTPAKKSRFKQERVRFEDEGPEERLDRHDTHISAVLARIIERDTSAVPVLLPC
ITGTAFPKVLRRSVVESEGQERAPKGRKSIFARQIAAQRSNNEDVQSLNGSETRDQSSAS
RHVGFSPLESMETERPESDVMARVGGPLLLSGQGLAIANSTMETMKIHEENQARLQAMSQ
SEILEEQRKLLAQLDPRLVDFVRSRKAQRTPESESSSKPVQKENFPPNSTSTELDHTMKA
QESQRDTMEDYEEDENPLVVQPPITEEELPIKPQKVWLHMDKVELDKLEWTRDLPAPSRL
STKKAMQARFDFAGTLIPATKDLPTHLGLHHHGEEPELAGYSLQELFLLSRSQLNQQRNL
AVSTLANVLTKARAGEYTSSLKGSVLSSLLDAGLLFLLRFSLDDGVEGVMSAAVHALRAL
LVSPDDEECLDNAFSWLLGMATFPLLPTVQEDEDEEDEGLDEALKETAKEKEEKKTDHDV
ARQDVVKGFLRMQGLPRLRYILEVLRPSPRVVLDILEVLIRIARHSTAAATQILNCPRLM
ETVISEFLPCSWTPTVSQAPSSLYGLPVALAMKLLRVLASAGRHACARILNSLGGKELLS
RLVVVDPSEMLLEAGEALRCTTEALRLFAVAAGYGQACSLYTDLYPVLVKRLQAGNRPCA
SSEAVLFLELDRIRALLVLLTQVTQTAGCHEELQRGLVSAQGTECPPPPPVLWSHVTGLQ
PTVISSLKGCVRALDGSAQMSSALILLPSYLLYVEAYYSQLCVQSSFQPVQCLQELESLT
SDVLLPLISHQAMQNLASSFRSSSVICNPGLSAPGGEVVPSLPGLFCSRLMTSSTIAGPN
SPLSLPTALLYLLNTITSIHKGLIQKFSRLILSDAVLGYLRSCIGAMPSVSHMSAWILRH
EHHLLYLLLRLAHKMVPVDPEVAKHAFLFHQVSLALLSWLLPGSEYLAHELMSVLTFSHS
LLPEGGCGEPEVAALAELQLKERTSPAVGALLRDALHHLPSIRGCYLTHLAHMEPSVLSS
RDRYLGRNPFVRSHLLPELTGPSLPSDWPFLPFISLYERTGQSAGGGQQVESLPAGSVQS
ATHCLQWLLVLESWREQALTAVPPVAKLARLACVFLCSSDLFLERPVQELTWALFRRLTR
PAQLEALDLGSAPPGLASFHDLYSALLAQYEAVSFGDLLFGCFMLLPLQRRYSVTMRLAV
FGEHVGMLRSLGVSLQQLPVPLEKFTSPMEDSLPLLRLYFRALVTGALKRNWCPVLYAVA
VAHLNAFIYSQHAVAEEVEAARRSLLRKTYYMTDEVLKNHLLLFWQPQQNSELGFSTYEQ
LPSIRARRLESIVGTVQKGEKGKILVP
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcgtcccaagtccgcagacagcgaggcggatctgctccgggagcagcaagag
cttctggcggcgggcggtcagtccactgtcactgtagtgaagcgccctgataaacgcaga
ggagacgctgctggtgcacatgagcaggaaaaacacagagatgttgtgactattgaggat
cttccagatgagattcccaccttgacccctgcaaagaagtctcgttttaaacaggagcgg
gtgcgttttgaagatgagggcccagaagagcgactggacagacatgatacccatatcagt
gctgttctcgccaggatcattgagagggacacgagtgcagtacctgtgttgctcccatgt
atcacaggcactgctttccctaaagtcttacgaagatctgtggtggaaagtgaggggcag
gaaagagctcctaaaggtagaaaaagtatttttgcacgtcaaattgcagcacagaggtct
aataatgaagatgttcagtctttaaatggttcagagactagagatcagtcttctgcatct
agacatgtgggcttctcaccattggagagcatggagactgagcgacctgaatcagatgtt
atggcgcgtgttggtggccccttgctactttcaggtcaaggacttgcgattgcaaatagt
accatggagacaatgaaaatccatgaggagaatcaggcaaggttgcaggcgatgtcccag
agtgagatactggaggaacagaggaagctgctagcacagcttgaccctagattagtggac
tttgtgagatctcggaaggcacagagaacaccagaatctgagtcatcatccaagcctgtg
caaaaagaaaactttccgcctaatagcacttctacagagttagaccacacaatgaaagct
caggaatctcaaagggataccatggaggattatgaggaagatgagaatccgcttgtagtt
cagcctccaattacagaggaggagctgcccatcaagccacagaaggtatggcttcacatg
gacaaggtggagctagacaaactggaatggactagagaccttcctgcacccagtaggctc
agcaccaaaaaggctatgcaagcacggtttgatttcgctggcactctcatcccagccacc
aaagacctgcccacccatttgggcctgcatcaccatggagaggagccagagctggctgga
tattcactgcaagagcttttcctcctctctcgcagtcagctcaaccaacagcgcaatctg
gccgtcagcactctcgctaatgtcctgaccaaagcccgtgctggtgagtacacttcctct
ctgaagggcagcgtcttgtcttctttactggatgctggactcctcttccttctgcgtttc
tccctggatgacggtgtggagggtgtgatgtcagcagcggtgcatgccttgcgagctctg
ctggtttcacccgatgatgaagagtgcttggataatgccttctcatggctactcgggatg
gcaacatttcctttgctgccaactgttcaggaggatgaggatgaggaagatgaaggcttg
gatgaagccttaaaagaaacggcaaaggaaaaagaagaaaagaaaacagatcatgatgtt
gctaggcaggatgttgtcaagggctttctgaggatgcagggacttcctcgactgcgttac
atcctggaggtgctgcggccctctccacgagttgttcttgatattctagaggttctgatc
agaatcgctcgccactcgaccgctgcagccacacagatcttgaactgcccacgactgatg
gagactgtgatttctgagttccttccctgctcctggactcctaccgtctcccaggctcca
tcttctttgtatggactgcctgttgctttggcgatgaagctgcttcgtgttttagcaagt
gcagggaggcatgcttgtgctaggatactgaactctctaggaggaaaggagcttttgtca
cgtttagtggttgtggatccatcagagatgttgctggaagcaggtgaagctcttcgctgc
actacagaggctctgaggttgtttgcagttgctgccggctacggacaggcttgcagtctt
tacacggatctgtatcctgtgctggtgaagaggttgcaggctgggaaccggccgtgtgct
tcgtctgaagctgtgctgtttctggagctggaccgaatcagagctctgctggtgctgctt
actcaggtcactcaaacggcaggatgccatgaagaactgcagagaggcctagtcagtgct
cagggtacagagtgtcctccacctcctcctgttctgtggagtcatgtgacgggtctccag
cccactgttattagctctctcaagggctgtgtgagagcactcgatggctcggctcaaatg
tcaagtgctctgattctgcttccatcctacctgctctacgtggaggcgtattattcacag
ctctgtgtgcaaagctctttccagccggtacagtgtctacaggaactagagtcactaact
tcagacgtgcttttgcccctgatatcccatcaggccatgcaaaatctggccagcagcttc
aggtccagctctgtgatctgtaaccccgggctgagtgcccctggtggggaggtcgtcccc
agtctgccaggcctgttctgctcgaggctgatgacctccagcacgatagcaggacccaac
tcccctctgtccctccctactgccctcctatacctgctgaacaccatcacctccatccac
aagggcttaattcagaagttcagtcgtctcatcctctctgacgctgtactgggttatctg
cggtcttgtatcggagccatgccctctgtttctcacatgagcgcctggattttacgccat
gagcaccacctgctgtatctactgctcagactggctcacaagatggttccagttgaccca
gaggtggccaaacacgctttcttgttccaccaagtatcgttggctttattgtcctggctg
ctgcctggcagtgaatacttggcacatgaactcatgtctgtcttgacattcagccacagc
ctccttcctgagggtggttgtggtgaaccagaggtggccgcgttggctgagttgcagctc
aaggagaggacttcacctgccgttggtgccctgctacgtgacgctcttcatcatttgccc
tccatccggggttgctacctcacccacctggcacacatggaaccctctgtcctttcatcc
cgggaccggtacctcggcagaaacccttttgtccgctctcatcttctacctgagctcact
ggcccctcgctgccttccgactggcccttcttaccgtttatcagtctttatgagcgaacg
ggacagtcagctggcggtgggcagcaggtcgagtctcttccagcagggtctgtacagtca
gccactcactgccttcaatggctgcttgtgctggagagctggagggagcaagcgctcacg
gctgtgccaccagtggctaagttagcccggctagcctgtgtgtttctgtgctccagtgac
ctcttcctggaacgacctgtgcaagagcttacttgggcgctgtttcgcagactaacacgg
ccagcccagcttgaggcgctggatctgggctcagctccaccaggcctggcttcctttcat
gacttatactcggctctactggcgcagtatgaggctgtgtcattcggtgacctgctcttt
ggctgcttcatgcttttgcctctacagcggcgctacagtgtcaccatgaggctggctgtg
tttggtgaacatgtgggaatgctgcgatcgctgggggtctcgctacagcagctgcctgtt
ccactggagaagttcacgtcccccatggaggactccctgcctctgttgcggctgtacttt
cgagcactagtaacaggagctctgaagaggaactggtgtcctgtgctttatgcagtggct
gttgcccatctcaatgcttttatctactcccagcatgcagtggcagaggaggtggaagcg
gcacgtcggagcctgcttagaaagacctactacatgacagatgaggtgttgaagaaccac
cttctgcttttttggcagccccagcaaaattcagagctgggcttcagcacttatgaacag
ctgccctccattcgtgcccgcaggttggaaagcattgtaggaactgtacagaaaggtgaa
aaaggaaaaatcctggttccatag
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