Rhinichthys klamathensis goyatoka (western speckled dace): 130102430
Help
Entry
130102430 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130102430
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130102430
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
Phage_int_SAM_5
V_ATPase_I
DUF5446
Motif
Other DBs
NCBI-GeneID:
130102430
NCBI-ProteinID:
XP_056124430
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MRSGKLKCSRAVVCLCVSCSKMAEARISVDQDEFLCPVCLDLLKDPVAIPCGHSYCKICI
TGCWDQEDEKRVYSCPQCRQTFRPRPALAKNTMLAELVEKLKKTKLPADCYAGAGDVQCD
VCTGRKHKAVKSCLVCLESYCQTHFERHEEFHSRKPHKVTEATGRLQEMICQTHDKLLEV
FCRTDQKFICVLCTMDDHKNHDTVSAAAQRTEKQKQLKETQRSFQQRIQQREKDLQQLRE
AVESHKRSAHTAVEDSERIFTELIRSIERSRSEATQRIRDQEKTAVSRAEERLERLEQEI
NDLRRRDAELEQLSHTQDHIRFLQSFQSLSAPPESTDVNDNPFSSLSSFDGVRESVRQLR
DRLEDFCKEKKISDRVTLSNIVPTTRNDFLQYSHQLNLDLNTVNKRLRLSEDNRVITDTS
FLKPQPYPDHPDRFDVHQVLCRESVCGRCYWEIEWSGYVCISVSYKSISRKGSGDECVFG
YNDQSWSLFCSSSSYSFRHNNIETELPVESISSRTGVCVCNRRTGVCVCNSRTGVCVCYS
RIGVCVDPSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFGVYKGSSVKLC
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagggaaactgaagtgcagtcgagctgttgtgtgtttgtgtgtctcatgcagt
aaaatggcagaagccagaatttcagtggatcaggatgagttcctgtgtccagtgtgtctg
gatctcctgaaggatccagtggccattccctgtggacacagttactgtaagatctgtatt
acaggctgctgggatcaggaggatgagaagagagtctacagctgccctcagtgccgacag
accttcaggccaagacctgctttagctaaaaacaccatgctggcagaactggtggagaaa
ctgaagaagactaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgac
gtctgtactggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctggagtcttac
tgtcagactcattttgagcgtcacgaggaatttcactcccgtaaaccacataaagtgact
gaagccactggacgactgcaggagatgatctgccaaacacatgataaactccttgaggtt
ttctgtcgcactgaccagaagtttatatgtgtgctgtgtacgatggacgatcataaaaac
cacgacactgtatcagctgcagcgcagaggacagagaaacagaagcagctgaaggagacg
cagaggtcgttccagcagaggatccagcagagagagaaagatcttcagcagctgagagag
gctgtagagtctcataagcgctctgcacacacagcagtggaggacagcgagaggatcttc
actgagctcatccgctccattgagagaagccgctctgaggcgacacagcggatcagagat
caggaaaagactgcagtgagtcgagctgaagaacgactggagcgactggagcaggagatc
aatgatctgaggaggagagacgctgagctggagcagctttcacacacacaggatcacata
cgtttcctgcagagtttccagtctctctcagctcctcctgaatctacagacgtcaatgac
aatcccttcagttctctctcctcttttgatggcgtaagagaatctgtccgtcagctgaga
gacagactggaggatttctgcaaagagaagaagatctctgacagagtcactctctccaac
attgttcccacgaccaggaacgacttcctacaatattcccatcagctcaatctggatctg
aacacagtgaataaacgcctccgtctgtctgaggataacagagtgattactgacacttct
ttcctaaagcctcagccgtatcctgatcatccagacagatttgatgtgcatcaggtgttg
tgtagagagagtgtgtgtggacgctgttactgggagattgagtggagtgggtatgtgtgt
atatcagtgtcatataagagcatcagcaggaagggatcgggtgatgagtgtgtgtttgga
tataatgatcagtcctggagtttgttctgctcttcctccagttactcattcagacacaat
aacatagagactgaactccctgtagaatccatcagcagtagaacaggagtgtgtgtgtgt
aacaggagaacaggagtgtgtgtgtgtaacagtagaacaggagtgtgtgtgtgttacagt
agaataggagtgtgtgtggatcccagtgcaggaactctgtccttctacagcgtctctgac
acaatgagcctcatccacacagtccagaccacattcactcagccgctctatcctgggttt
ggggtttataaaggatcatcagtgaaactgtgttga
DBGET
integrated database retrieval system
