Rhinichthys klamathensis goyatoka (western speckled dace): 130105416
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Entry
130105416 CDS
T09701
Symbol
rbfox3a
Name
(RefSeq) LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 3
KO
K14946
RNA binding protein fox-1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130105416 (rbfox3a)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130105416 (rbfox3a)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
130105416
NCBI-ProteinID:
XP_056127390
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MFPSLCCLPISLLPFGFILVLLCVSDSFCVFLFIGQSDSPRSDCPLLPTESDTSVVAVRP
XQAQTQLYMETPSWAETKPGNGLCKTGSIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQE
APAPPEAMAQPYAPAQYPPPPPQNGLPGEYTHPGQDYTGPSPVPEHAAALTIYTPTQTHS
EPPGTDSSTPSLTGTSSIPQVDDVAQTDGSQQLQLQPSDSSEKQQPKRLHVSNIPFRFRD
PDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNN
ATARVMTNKKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGR
AVYNTFRAAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVY
ATADPYHHTIGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttcccctccctctgctgcctccccatttctctcctaccgttcggcttcatcctcgtt
ctcctctgtgtttcagattctttttgtgtttttctgttcatcggacagagtgactcgcca
cgctccgactgcccccttctccccacagaatcggacacttctgtggttgcagtgagaccc
ncacaagctcagacacagctgtacatggagacccctagctgggcagaaacgaaaccagga
aacgggctgtgtaaaacaggaagcattgctctctttggaaacgtagtgtacagtgggctg
ctgaacgatcacttctggcatttcggggtgcccctcgtcacaagactgggtaaccaggag
gccccagctcccccagaagccatggctcagccgtacgccccagcgcagtatcctccccct
ccacctcagaacgggttgcctggcgaatacacccaccctgggcaggactacacggggccc
agtccggtccctgagcacgctgcagccctcactatctacacacccacacagacacacagc
gagccacctggcactgacagcagcacgccttcccttacagggactagcagcataccacaa
gtggacgatgtggcacagacagacggctcccagcagcttcagctccagccctcagactct
tcggagaagcagcagcccaaacggttacacgtctccaacattcccttccgcttccgtgac
ccagacctccggcaaatgttcgggcaatttgggaaaattttggatgtggaaattattttt
aacgagcggggctctaagggttttggtttcgtaacttttgaaacaagcgcagacgcagac
cgcgcacgggagaaattaaatggtacaatcgtagagggacgcaaaattgaggtaaataat
gcaacggcaagagtaatgacaaacaaaaaagtggccaacccctatacaaacggctggaag
ctgaatccagtggtgggagctgtctatggtcctgaattttatgcagtgacaggtttcccc
tatccaaccacaggggcgacagtggcttacaggggcgcccacttgagaggcagaggtcgt
gccgtctacaacacgttccgtgccgcgcctccaccccctcccattcccgcttatggagct
gtggtttaccaagatggcttctacggtgctgagatctatggtggctatgcagcatacaga
tatgcccaaccagccgcagcagctgcagcggcctacagtgacagctatggcagagtctat
gcaacagcagacccttatcaccacacgattggacctgcagccacgtacagcgtgggcact
atggctagcctttacagaggaggttacagtcgcttcacaccctactag
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