Rothia kristinae: I6G21_06800
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Entry
I6G21_06800 CDS
T06977
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
rkr
Rothia kristinae
Pathway
rkr00521
Streptomycin biosynthesis
rkr00523
Polyketide sugar unit biosynthesis
rkr00541
O-Antigen nucleotide sugar biosynthesis
rkr01100
Metabolic pathways
rkr01110
Biosynthesis of secondary metabolites
rkr01250
Biosynthesis of nucleotide sugars
Module
rkr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rkr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
I6G21_06800 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I6G21_06800 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I6G21_06800 (rfbD)
Enzymes [BR:
rkr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
I6G21_06800 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
I6G21_06800 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
NAD_binding_4
Polysacc_synt_2
GDP_Man_Dehyd
NmrA
Motif
Other DBs
NCBI-ProteinID:
QPT54703
UniProt:
A0A7T3F932
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All DBs
Position
1545038..1546468
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AA seq
476 aa
AA seq
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MAELSITTTPIPGLLVVDLPVHGDNRGWFKENWQREKMTAAGLPDFGPVQNNISFNAARG
TTRGIHAEPWDKYVSVATGEIFGAWVDLRAGESFGRVFTTRLDPARAVFVPRGVGNAFQT
LVDDTAYAYLVNDHWSADAQEEYAFLNLADETAGIEWPVPLAEAELSEKDRNHPRLAEVE
PVAPAPLLITGATGQLGRELVRQCRERGIPHRAVGREELDLARPESWRTSFRWRSYRAIV
NAAAHTAVDAAQTPEGRREAWAANATGVAALAAVAVEHRLPLVHVSTDYVFDGARPVGQA
YTPDDAVAPLGVYGQSKAAGEAAVAAVPQHHIVRTSWVIGEGRNFVRTMASLAERGVDPA
VVGDQHGRPTFTEDLAAGILHLQEQNAAPGIYHLSNEGPDTTWAELAASVYELTGHDPAR
VSATTTAEYFVDKPDAAPRPANSLLDLTKLEQTGFRPRDHREALAAYLAGREVESA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctgagcatcaccaccacccccatccccgggctgctcgtcgtggacctgccc
gtgcacggagacaaccgcggctggttcaaggagaactggcagcgggagaagatgaccgcc
gccgggctgccggacttcgggcccgtgcagaacaacatctccttcaacgccgcccgggga
acgacccgcggcatccacgccgagccgtgggacaagtacgtctccgtggccaccggggag
atcttcggggcgtgggtggatctgcgcgccggggagagcttcggccgggtcttcaccacc
cgcctggatccagcccgcgcggtgttcgtgccacgcggggtgggcaacgccttccagacc
ctcgtcgatgacacggcgtacgcctacctggtcaatgaccactggtccgccgacgcccag
gaggagtacgccttcctcaacctcgccgatgagaccgccggcatcgagtggcccgttccc
ctggccgaggcggagctgtccgagaaggatcggaaccacccccggctggccgaggtggag
cccgtggcccccgccccgctgctgatcaccggggccaccgggcagctgggccgggagctg
gtgcgccagtgccgcgagcgcggcatcccgcaccgggccgtcggccgcgaggagctggac
ctggcgcgcccggagtcctggcgcacctccttccgctggcgctcctaccgcgccatcgtc
aacgccgccgcgcacaccgcggtggacgcggcccaaacccccgaggggcgccgggaggcc
tgggcggccaacgccaccggggtggccgccctggccgcggtggccgtcgagcacagactg
ccgctggtgcacgtgtccaccgactacgtcttcgacggggcccgccccgtcgggcaggcc
tacaccccggatgacgccgtcgccccgctgggggtctacgggcagtccaaggccgcgggg
gaggccgcggtggccgcggtgccgcagcaccacatcgtgcggacctcgtgggtgatcggg
gaggggaggaacttcgtgcgcaccatggcctccctcgccgagcgcggcgtggaccccgcg
gtggtgggggaccagcacgggcgacccaccttcaccgaggacctggccgcggggatcctg
cacctgcaggagcagaatgccgccccggggatctaccacctgagcaacgaggggccggac
accacgtgggccgagctggcggcgtccgtctacgagctcaccggccacgacccggcccgg
gtctcggcgaccaccaccgccgagtacttcgtggacaagcccgacgccgccccgcgcccg
gccaactccctgctggatctgacgaagctcgagcagaccggcttccgcccgcgggatcac
cgcgaggccctggccgcgtacctggcgggacgagaggtggaatccgcatga
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