Rhodoluna lacicola: Rhola_00013540
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Entry
Rhola_00013540 CDS
T03203
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rla
Rhodoluna lacicola
Pathway
rla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rhola_00013540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rla03400
]
Rhola_00013540
Enzymes [BR:
rla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rhola_00013540
DNA repair and recombination proteins [BR:
rla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rhola_00013540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AIC48143
UniProt:
A0A060JNK8
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All DBs
Position
1381330..1382121
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AA seq
263 aa
AA seq
DB search
MRIATHNVNSIRTRVDRVVSWLERTNTDVLAMQEIKCKPDQFPYKQFEDAGYQITMHGLN
QWNGVAFASRIPAEDVEIGFSGMPAFGKEGKEAVEEARAIGATFNGVRLWSLYVPNGREI
GDPHFHYKLDWLDRLAGNVAEWVEHEPDQPLALMGDFNIAPLDTDVWNIDDFAGLTHVTP
EERQAFEAFEQIGLQDVVRERIPDGYTYWDYQQLRFPRNEGMRIDFILGSEPFASRVTSA
VIDRDERKGEAPSDHVPVVVDID
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacccacaacgtaaattccatccgcacacgcgttgatcgtgtggtttct
tggctagagcgaaccaacaccgatgtccttgccatgcaagagatcaagtgcaagccagat
cagtttccgtataagcaatttgaggacgccggctaccaaatcaccatgcacggcctaaac
cagtggaacggcgtggccttcgccagcagaattccggccgaggatgtggagattggcttt
agcggaatgccagcttttggcaaagagggaaaagaagccgtcgaagaagctcgtgcgatt
ggtgccacattcaacggcgtgcgtctctggagtttgtatgtgccgaacggtcgcgaaatt
ggcgacccgcactttcactacaagcttgactggcttgaccgcttggccggcaacgttgcc
gaatgggttgagcacgaacctgatcagccgctggcactgatgggtgatttcaacattgcg
cccctggacactgacgtctggaacatcgacgacttcgccggattgactcacgtgacacca
gaagagcgccaagcctttgaagcctttgagcaaattggattgcaagatgttgttcgagaa
agaattcccgatggctacacctactgggattaccagcaacttagattcccccgcaacgag
ggaatgcgaattgactttattttgggctccgagccttttgcctcgcgcgttacctctgcg
gtgattgatcgcgatgagcgcaaaggtgaagcaccaagtgatcacgtgcccgtggtcgtt
gacattgactag
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