Rhodomicrobium lacus: QMO75_07580
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Entry
QMO75_07580 CDS
T09241
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rlac
Rhodomicrobium lacus
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rlac03009
]
QMO75_07580
Enzymes [BR:
rlac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
QMO75_07580
Ribosome biogenesis [BR:
rlac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QMO75_07580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NfeD
Motif
Other DBs
NCBI-ProteinID:
WKW52316
LinkDB
All DBs
Position
1688823..1689803
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AA seq
326 aa
AA seq
DB search
MTIEKRAVRTDDDGLRVDRWLKKNYPALPHTLVQKLVRTGQVRVDGGRVKADSRLSAGQE
VRVPTHFAEPENAPQPSLKPPPGLSKADRDFIERMIVFENDEMFILNKPFGIAVQGGTKT
TRHIDGLLAGMADRFGGERPRLVHRLDRDTTGILVVAKDRQTAARLGRLFQTRSVQKIYW
AITRGIPKPPQGKVEAALVKAAGPEGDRVRKARPGEQDLAQHATTFYSVIDRAANMAWVS
LKPVTGRQHQLRAHMDILGTPILGDQKYGDGTEIPIEGIERKLHLHARRLTLKDPKLGEI
DISAPLPSHIAQTFELLGFDSARYGE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgaaaagcgtgcggtccgcaccgacgacgacggccttcgtgtcgatcgctgg
ctgaaaaagaattacccggcactgccccatacgctcgtgcagaaacttgtccgcaccgga
caggtccgcgtcgacggcggacgcgtgaaggcggacagccgcctttcggcagggcaggaa
gttcgcgtgcccacgcatttcgccgagcctgaaaacgcgccgcagccttcgctgaaaccg
cctccggggctctccaaggccgaccgcgatttcatcgagcggatgatcgtgttcgagaac
gacgagatgttcattctcaacaagcctttcggcatcgccgttcagggcggcacgaagacg
acgcgtcacatcgacggactgctcgcgggcatggccgaccgctttggcggcgaacgtccg
cgcctcgtgcaccggctcgaccgcgataccaccggcattctcgttgtcgcgaaggaccgc
cagactgcggcccgcctcggccggctgttccagacacgctcggtgcagaagatctactgg
gcgatcacgcgcggcatcccgaagccgccacagggcaaggtcgaggccgcgctcgtcaag
gcagcggggccggagggcgaccgcgtgcgcaaggcgcgtcccggcgagcaggatctcgcc
cagcacgcgacgacgttttattccgtcatcgaccgcgccgcgaacatggcgtgggtatcg
ctgaagccggtgaccggacgccagcatcagcttcgcgcgcatatggacattctcggcacg
cccattctcggcgatcagaaatatggcgacgggaccgaaatccccatcgaaggcatcgaa
cggaagcttcatctgcatgcgcgacggctgacgctcaaggatccgaagctcggcgaaatc
gatatttccgcgccccttccgtcgcatatcgcgcagacgttcgagcttctcggattcgat
tcagcccgttacggggaataa
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