Rubripirellula lacrimiformis: K227x_13180
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Entry
K227x_13180 CDS
T07352
Symbol
uvrB_1
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K227x_13180 (uvrB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_13180 (uvrB_1)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K227x_13180 (uvrB_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K227x_13180 (uvrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA
Kinesin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QDT02939
UniProt:
A0A517N712
LinkDB
All DBs
Position
complement(1764222..1766375)
Genome browser
AA seq
717 aa
AA seq
DB search
MPKPSPTSAAKRSAAAKPDDQGLPLADFHLHQPFKPGGDQPQAIEQLTRNFKAGRKEQVL
LGATGTGKTFTMANVIANVGRPALILSHNKTLAAQLYGEFKEFFPENAVHYFVSYYDYYQ
PEAYIPQRDVYIEKDSSINEEIDRLRLATTSSLVSRRDVVIVASVSSIYGLGSPKEYKAQ
IVALHRGEKTRRDHLLLKFVDILYERNDIAFERGRFRVRGDSIELWPSYEEFAYRIEMWG
DEIEQISMIKPVSGETIKVLDNLYIYPARHFVMPENRIQAALRVIKEELAQQVETFQSQG
KLLEAQRLSARTRFDLEMMAEVGHCPGIENYSRPLSGKPPGATPDTLYDFFPDDFITFVD
ESHVTVSQVRAMYAGDRSRKETLVSHGFRLPSAMDNRPLKFEEWEARTGQICFVSATPAD
YELERTSGEVVEQIIRPTGLLDPVVEVVSARGQVNHLLEEIRKRAAIDERVLVTALTKRL
AEDLATFFQEQNVRCRWLHSELDAFERVELLQDLRGGQFDCLVGVNLLREGLDLPEVSLV
AILDADKEGFLRSETSLVQTIGRAARNANSKVILYADKVTRSMKLAMDETERRRSVQQAY
NEKHGITPQTVRKAIRQGIEADASKRRKATAEAKAQSDGAYITLEYVEALEQEMLAAAEG
LEFERAASLRDRVLQLKDNIGKPLSEIEEEKPARSGGKGGRKGRKGIRGSKIPRPKA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccttcgcccacctccgccgccaaaagatccgccgccgccaaaccggacgac
cagggtctgccattggcggatttccacctgcaccaacccttcaagccgggcggcgatcaa
ccgcaagcgatcgaacagttgacgcggaatttcaaggctggccgcaaggaacaagtcttg
ttgggagccaccgggacgggcaagacgttcacgatggcgaacgtcatcgccaacgtcggc
cgaccggcattgatcctaagtcataacaagacgttggcggcacagctttacggcgagttc
aaagagttctttcccgagaacgccgttcactacttcgtcagctattacgactactatcag
cccgaggcctacatccctcagcgtgacgtctatatcgaaaaagattcgtcgatcaacgaa
gaaatcgatcggctgcgactggccacgaccagttcgttggtttcccgccgcgacgttgtc
atcgttgcatcggtcagcagcatctacgggttgggttcgcccaaagaatacaaagcccaa
attgtggcgttgcaccgcggcgagaaaacacgccgcgatcacctgctgttgaaattcgtc
gacatcctttacgaacgcaacgacatcgcgttcgaacgaggccggtttcgcgtccgcggc
gactcgatcgaactgtggcctagttacgaagaattcgcctatcggatcgagatgtggggt
gacgagatcgaacagatttcgatgatcaaacccgtgtccggtgaaaccatcaaagtactg
gacaacctttacatctatccggcacgccactttgtgatgcccgaaaaccgtatccaagct
gccttgcgagtgatcaaggaagaactagcccagcaggtggaaacctttcaatcgcaggga
aagctgttggaagcccagcgactatcggcccgcacgcgattcgatctggaaatgatggcc
gaagtgggtcactgcccgggcatcgaaaactacagccgaccgctatcgggcaaaccgccc
ggtgcgactcccgacacgctgtatgactttttccccgacgacttcatcacgtttgtcgac
gaatctcatgtgaccgtttcgcaggtccgggcgatgtatgccggcgaccgcagccgcaaa
gaaacgttggtgtcgcacgggttccgattgcccagcgcgatggacaaccgcccgctgaag
ttcgaggaatgggaggcccgcaccggacagatctgtttcgtcagcgcaacaccggccgac
tatgaactcgaacgcaccagcggcgaagtggtggaacagatcatccgcccaaccggactg
ttggacccggtcgtcgaagtcgtttcggcgcgcgggcaggtgaaccatctgttggaagaa
atccgcaaacgggcagcgatcgacgaacgcgtcttggtgaccgctttgaccaaacgtttg
gccgaagacctggcgaccttctttcaagaacagaacgtgcgttgtcgctggctacacagc
gaactggacgcgtttgaacgagtcgaactgttgcaagatctgcgcggcggtcaattcgat
tgtttggtcggcgtgaacctgcttcgcgagggcttggaccttcccgaggtatcgctggtc
gccattctggacgccgacaaagagggattcctgcgcagcgaaaccagcctggtccaaacg
atcgggcgggcagcccggaacgccaactcgaaagtcatcctgtatgccgacaaggtgacc
cgttcgatgaagttggcgatggacgaaaccgaacgccgacgatcggtccaacaggcatac
aatgaaaagcatggcatcaccccgcaaaccgttcgtaaagccatccggcaaggcatcgaa
gccgatgccagcaagcggcgcaaggcgaccgcggaagccaaagcccagtccgacggcgcc
tacatcacgctggagtacgtcgaggcgttggagcaagaaatgcttgccgccgccgagggg
ttggaattcgaacgggccgccagcctgcgtgatcgcgtgctgcagttgaaagacaacatc
ggcaaaccgctgtcggaaatcgaagaagagaaacccgcccgttccggtggcaaaggcggc
cgcaaaggtcgcaagggaatccgtggcagcaagatccctcgcccgaaagcgtaa
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