Rubripirellula lacrimiformis: K227x_18470
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Entry
K227x_18470 CDS
T07352
Symbol
omcB_1
Name
(GenBank) Large cysteine-rich periplasmic protein OmcB, serovars L1/L3 precursor
Organism
rlc
Rubripirellula lacrimiformis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
CARDB
Motif
Other DBs
NCBI-ProteinID:
QDT03463
UniProt:
A0A517N8L6
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Position
2434651..2438079
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AA seq
1142 aa
AA seq
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MDRVKRRFTVAMAAIAIPALLLLMISMTDAAQPDGAAVAVAVGNGDSVEGGEIRQVVGKQ
LERGGTRPGLLQSILSGSTSNRSTTHNTTARSDQSRGLLDGLFGGNSSRTSSTTTRHTTA
PRSGTANSNTAKSGSVNWEGIPYHEADASNARTVPAPIRDPKQVAADSSTRIIRGGSTNT
RTVPNQSSTASTSTRTMQAPTIARRPSAPVLPTPPADSVQYRMSATTGTANDLSTTSSSR
RSNRRDVDAFAVAKNSTSDLKVTQAPEAPASDDVVDLVPRVSRRTIPATVAKTQVAKPAE
TKAVPAATETIKADSTKVAAKPAPAKTSVPTADVPKRAVAAETKVAETKVAETKVAETKV
AETNVAAPNATASNVAATTPKPTAAPVSGTPALTASPAPAANSVATVPSASLDAPSAASP
AYVTPVDPATTPVPTMTMSATPQAVASAPPVPAQPYAASMPSNSMPSNSMPASSVSHRAG
PPAAAFAPAQALPNGTQYGSQATNFGPSGQIAIGSGLPQGGPRDIKFGGTNMNGSVATQD
NFQPTPSITRPYVSTPSSSLPTYETARATRDPFDDPYGRRDDRHSFGAGPTSPNLADRSM
GPATTAATSRNPNAGQSSAGDATSSVPMHPIAGYTASGSQATTAQGDNFKRTNDDSRNRM
RTGSGQDHTVAGAGMASSELPGIRVVTRGPNEVMIRQTNEYEIRVENRGSINAEGLIVRA
MIPDWAEVRGQNATRGEVESQGEGSIERLVWKIDQLPAGASEKLFVRLMAARSGTHDVDV
DWTLMPQKTVTQIKVHEPQLDLTIEGPDEVVYGQSQTYKVRVLNPGDGVAPNVVFTLSPN
SATPQTQRIGDIPAGKEAQFDVELTAQDLGDLKIHGLAAGDYELRSEATKTIRVSAAQIE
AVLNGPELKYQNTEAMYNLQVENVGSATTERVVASLRLPAGVKYLGGIEGAQLRANTLTW
EIASLADGATRDYQFRCNMTATGEHVFSFECKGTAAGHADVALTTRVESISDLVLTIHDP
IAPAPIGSEVTYEIVVRNRGSREAKDVKTLAQFSHGIEPQRVEGQSGEVVTGQVVFDTIP
RIGAGEEVHMKVVAIADRAGHHRFRTEVRSGDTVLVAEEATHYMSPQADRVSRRSSDSKQ
IR
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgaaacgccgatttactgtcgctatggcagcgatcgctatccccgcccta
ctgttgttgatgatttcgatgactgatgcagcacagccggatggtgctgcagtggctgtg
gccgtcggaaatggcgacagcgtcgaaggtggcgagattcgacaggtcgtcggcaaacag
cttgaacgcggcgggactcgcccgggattgctgcagtcgatcctcagcggttcgacctcc
aaccgttccaccactcacaacaccacggcgcgaagcgatcaatcgcgtggattgttggat
ggtttgtttggtggtaattcgtcacgcaccagttcgacgaccactcgccatacaaccgct
ccacgcagcggaaccgcgaattcaaacacagccaaatcgggcagcgtgaactgggaaggc
atcccttaccacgaagccgatgccagcaacgcacgaacggttccagcgcccattcgcgat
cccaagcaggttgccgccgactcttcgacgcgaatcatccgcggcggatcgaccaatacc
cgcacggttcccaatcaatcatcaaccgcgtcgacctcgacccgaacgatgcaggcgccg
acaatcgctcgtcgtccttcggctcccgtattgccgacgccacccgccgatagtgtccag
taccggatgtcggcaacgaccggcaccgccaatgatttgtcgacgacgtccagcagtcgc
cgcagcaatcgccgtgacgtcgacgcgtttgccgtcgcgaaaaacagcacctcggatttg
aaggtcacacaggcgccggaagcacccgccagcgacgatgttgtcgatctggtaccacgg
gtcagtcgtcgcacgatccctgccaccgtggccaagacccaagtggcgaagccagccgaa
acgaaagctgtgccagcggcgactgaaaccatcaaggccgattcgaccaaggtggctgca
aaaccggcacccgccaagacaagcgtcccaacggccgatgtgcccaagcgagcggtcgcc
gccgaaaccaaagtcgccgaaaccaaagtcgctgaaacgaaggtcgccgaaacgaaggtt
gctgaaaccaatgtcgccgcgcccaacgctaccgcatcgaatgttgctgccaccacaccc
aagccgactgccgcacccgtgtcgggaacgcctgcactgaccgcatcacctgcacccgca
gcaaactcggtcgctactgttcccagcgcttccctggatgccccatcggccgccagcccc
gcatacgtgacacctgtggatcccgcgaccaccccggttcccacaatgacgatgtccgcc
acaccacaggccgttgcatcggcgccacctgttcccgcacaaccatacgccgcatcaatg
cctagtaattcaatgcctagtaattcaatgcctgcgtcctcggtatcgcaccgagccgga
ccacctgctgctgcgttcgcacctgcccaagcattgccaaacggtacccagtacggatcc
caagcgaccaactttggtccgtccggccaaattgcgatcgggtcggggttgccacagggt
ggaccacgcgacatcaagttcggcgggaccaacatgaacggttcggttgccacgcaagac
aattttcagccgacgccatcgatcactcggccctacgtcagcacgccaagttcgtcgctg
ccaacgtacgaaaccgcccgagcgacacgcgatccgtttgacgatccctatggtcgccgc
gacgaccgacacagttttggtgctggaccgaccagcccgaatttggccgaccgtagcatg
ggacctgcgacgaccgcagcaaccagccggaatcccaacgcgggtcaatcgtcggctggc
gacgcaacgtcgtcggtaccgatgcacccgatcgccggttacaccgcgtccggttcgcag
gctaccacggcccaaggcgacaacttcaaacgtaccaacgacgattcgcgaaatcgaatg
cgaaccggttccggccaagaccatacggtcgcaggagctgggatggcatcgtcggaactg
cctggcattcgagtcgtcacccgcggcccgaacgaggtcatgatccgtcaaaccaacgaa
tacgagatccgagtggagaatcgtggttcgatcaacgccgaagggttgatcgtgcgagcg
atgattcccgactgggccgaagtccgcggacaaaacgccacccgtggcgaagtcgaatcc
caaggcgaaggatccatcgaacgattggtctggaaaatcgaccaactgcccgccggtgct
tctgagaaactgttcgtgcggctgatggctgcccgcagcggtactcacgacgtggacgtc
gactggactctgatgccgcagaagaccgtgacccagatcaaagtgcacgaaccgcaattg
gatctgaccatcgaaggtcctgatgaagtcgtctatggccagtcgcaaacttacaaggtt
cgtgtgctgaaccccggtgacggcgtcgcacccaatgtggtgttcacgttgtcgccaaat
tcggccacgccgcagactcagcgaatcggagacatcccggccggtaaagaagctcagttc
gacgtcgaactgaccgcccaagatctcggggatctgaaaatccacggtctagcggccggt
gactacgagcttcgcagcgaagcgaccaagacgattcgcgtctcggctgctcagatcgaa
gccgtcctgaacggacctgaactgaagtaccaaaacaccgaagcgatgtacaacctgcag
gttgaaaacgtcgggtcggccaccaccgaacgtgtcgtcgcttcgctgcgattgccagcc
ggtgtgaagtacctgggcggaatcgaaggagcccagttgcgtgcgaacaccctgacctgg
gaaatcgccagcttggccgatggtgccacacgggactatcagttccgctgcaacatgaca
gccaccggcgaacacgtcttctcgttcgaatgcaaaggcaccgccgcgggacacgcggat
gtggctttgacgacgcgagtcgagtcgatctcggacttggtgctgacgatccatgacccc
atcgccccggcacccatcggcagcgaagtgacctacgaaatcgttgttcgcaaccgcggc
agccgagaagccaaagacgtcaagactctggctcagttcagccacggcatcgaaccacaa
cgcgtcgaaggccaaagtggcgaagtcgtgaccgggcaagtggtgttcgatacgatccca
cgaatcggtgcgggcgaagaagtccacatgaaggtcgtcgcgatcgctgaccgggccgga
caccaccgcttccgaaccgaagttcgatcgggtgacactgtcttggtcgccgaagaagcg
actcactacatgagtcctcaggccgaccgcgtcagccgacgcagcagcgacagcaagcag
attcgctag
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