Rhizobium johnstonii: RL1587
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Entry
RL1587 CDS
T00402
Symbol
uvrC
Name
(GenBank) putative uvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
rle
Rhizobium johnstonii
Pathway
rle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RL1587 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL1587 (uvrC)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RL1587 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
CAK07082
RhizoBase:
RL1587
UniProt:
Q1MIX8
LinkDB
All DBs
Position
complement(1655028..1657070)
Genome browser
AA seq
680 aa
AA seq
DB search
MNGRKLPDGGVLYDDTDESEDDIEVEGDASVAAPLAATVDWNAGSLNETGLLGAELIGEF
VKRLPNSPGVYRMFNAEGDVLYVGKARSLKKRVNNYAVGRVHSNRIAQMVRQTANMEFVT
TRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITGDHRAPAIFKHRGARARKGDYF
GPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLLYQIKRCSGPCTHEVSDGGYGE
LVQEAKDFLSGKSQKVKSHMAEAMNQAAEDLDFERAAIYRDRLAALSHVQSHQGINPAGV
EEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADPQLSSAEVLNSFLAQFYDDKPV
PKQIMLSQTVEELELLAAALSEKAGHKVSMLVPQRGEKRDLVDHVVGNAREAHGRKLAET
ASQSRLLEGFKETFGLAYAPQRIEIYDNSHIMGTNAVGGMVVAGPEGFVKNQYRKFNIKS
TDITPGDDFGMMKEVMTRRFSRLIKEEGIPDRTAQVATPDAADMPFPTWPDVILIDGGQG
QMTAVRAILAELGITDSVTAIGIAKGVDRDAGRERFFPPGRESFTLPPRDPVLYFIQRMR
DEAHRFAIGSHRARRKKEMIKNPLDEIGGIGPSRKRALLQHFGTAKAVSRAALSDLMAVE
GISEAVARQVYNHFHDDAAK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacgaaagctgccggatggcggcgttctctacgatgatacggatgagagcgaa
gacgatatcgaggtggaaggcgacgcttccgtcgccgcgccgcttgcggcgacggtcgac
tggaatgcaggcagcctcaatgaaaccgggctcctcggcgcggaactgatcggcgaattc
gtcaagcggctgccgaacagccccggcgtctaccgcatgttcaatgccgagggcgacgtg
ctctatgtcggcaaggcgcgcagcctgaagaagcgcgtcaacaattacgccgtcggccgc
gtgcattccaaccgcatcgcccagatggtgcgccagacggcgaacatggaattcgtgacg
acgcgcacggaaaccgaagcgctgcttctggaagcgaatctgatcaagcgcttgcggccg
cgctttaatgtgctcttgcgcgacgacaagtcctttccctatatcctcatcaccggcgac
caccgggcgcctgccattttcaagcatcgcggtgcgagagcgcgaaagggcgactatttc
ggacccttcgcttcggccggcgcggtcggacggacgatcaactcgctgcagcgcgccttc
ctgatccgcacctgcaccgacagcgtcttcgaaacgcgcacccggccctgcctgctctac
cagatcaagcgctgttccgggccgtgcacccacgaggtcagcgatggggggtacggcgag
ctggtgcaggaggcgaaggacttcctgtccggcaagagccagaaggtgaagtcgcatatg
gccgaggcgatgaaccaggcggccgaggacctcgacttcgagcgggcggcgatctatcgc
gatcgcctggccgcactttcgcatgtgcagagccaccagggcatcaatccggccggcgtc
gaggaggctgacgttttcgccatccatcatgagggcggcatctcctgcatccaggtgttt
ttcttccgcaccggccagaactggggcaaccgcgcctatttcccgaaggccgatccgcag
ctttcgagcgccgaagtgctgaattccttcctcgcgcagttctacgacgacaagccggtg
ccgaagcagatcatgctgtcgcagacggtggaggagctggagctgctcgcggccgcactc
agcgaaaaggccggccataaggtttccatgctagtgccgcagcgcggcgagaagcgggat
ctggtcgaccatgtcgtcggcaatgcacgcgaggcgcatgggcgaaagcttgccgagacg
gcgtcgcagtcgcggctgctcgaaggtttcaaggagacgttcgggcttgcctatgcaccg
cagcgcatcgagatctacgacaattcgcatatcatgggcaccaatgccgtcggcggcatg
gtggtcgcggggccggaaggtttcgtcaagaaccagtaccgcaagttcaacatcaaatcg
accgacatcacgcccggcgacgacttcggcatgatgaaggaggtgatgacgcggcggttc
tcacggctgatcaaggaggaaggcattcccgaccggacggcgcaggtggccacgcccgat
gcagccgacatgcccttcccgacctggcccgatgtgatcctcatcgacggcggccagggg
cagatgacggcggtgcgcgccatccttgccgaactcggcatcaccgacagcgtcacggcg
atcggcatcgccaagggcgtcgaccgcgatgccgggcgcgaacgcttcttcccgccggga
cgcgagagtttcacgctgccgccgcgcgatccggtgctctatttcatccagcgcatgcgc
gacgaggcgcaccgtttcgcgatcggctcgcaccgggcgcggcgcaagaaggaaatgatc
aagaacccgctcgacgagatcggcggcatcggcccgtcgcgcaaacgcgcactgctccag
catttcggtacggcgaaggcggtttcgcgcgcagccctgtccgacctgatggcggtggaa
ggcatatcggaagcggtcgccaggcaggtctataaccatttccacgacgacgccgcgaaa
taa
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integrated database retrieval system
