Rhizobium johnstonii: RL1626
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Entry
RL1626 CDS
T00402
Symbol
rmlC
Name
(GenBank) putative dTDP-rhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00521
Streptomycin biosynthesis
rle00523
Polyketide sugar unit biosynthesis
rle00541
O-Antigen nucleotide sugar biosynthesis
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01250
Biosynthesis of nucleotide sugars
Module
rle_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RL1626 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RL1626 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RL1626 (rmlC)
Enzymes [BR:
rle01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RL1626 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAK07121
RhizoBase:
RL1626
UniProt:
Q1MIT9
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Position
complement(1700375..1700953)
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AA seq
192 aa
AA seq
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MRIETAAIEGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVTFIQDNESLSAQAGTVRG
LHFQIPPFAQGKLVRCLAGRIMDVVVDIREGSPSFGKWLSQELSPETGKQLWIPAGFAHG
FATIEPNSVISYKVTAPYSPQHDRGIAWNDPMIGIRWPFDERDMVSSDKDKTLPRLADLP
GHFSYSTQQPKD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgagaccgcggccatcgagggcatcgttgcaatcacgccgccacgcttcggc
gatcaccgcggctacttctccgaggtattcaaggatgcctggttccgggaaaatgtggcc
gacgtcaccttcatccaggacaatgaatcgctttcggcgcaggccggcaccgtccggggg
ctgcatttccagataccgcccttcgcacaaggcaagctggtgcgctgccttgccggccgg
atcatggatgtcgtcgtcgatatccgcgagggatcaccgagcttcggcaaatggctctct
caggagctctcgccggaaaccggcaagcagctctggataccggccggtttcgcacacgga
ttcgcaacgatcgagccgaacagcgtcatcagctacaaggtaaccgcaccctacagcccg
cagcatgatcggggcatcgcgtggaacgatccgatgatcggcattcgctggcccttcgat
gagagagacatggtatcatcagacaaggacaagacgctgccgcggctcgccgatctgcca
ggccatttttcctattctacacagcaacccaaggattga
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