Rhizobium johnstonii: RL3334
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Entry
RL3334 CDS
T00402
Symbol
rnsA
Name
(GenBank) putative ribonuclease I
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rle03016
]
RL3334 (rnsA)
Enzymes [BR:
rle01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
RL3334 (rnsA)
Transfer RNA biogenesis [BR:
rle03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RL3334 (rnsA)
Prokaryotic type
RL3334 (rnsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
CAK08821
RhizoBase:
RL3334
UniProt:
Q1ME06
LinkDB
All DBs
Position
complement(3499175..3499957)
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AA seq
260 aa
AA seq
DB search
MLICSCIVLFLGVEMSSMQLRTLTFAVSMVVAGAGVAQEAGGRTRFILAASWQPAFCQTN
QKKAECASQTGERPDATNFSLHGLWPMRQDYCGVSAEQKAADKDGDWNKLPEVTLAAETK
TALAKAMPGTQSGLERHEWVKHGTCTKMSADDYFGVGVHLVGALNASAVRDLFAANIGKP
VKADAIKAAFDKSFGPGAGDRVKMSCRRAGNVRMISELTIGLSEAAGAASAKTTGLADLI
QGAGKTSFGCDEGVVDAAGF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcttatttgttcctgtattgttctttttttgggggttgaaatgagcagcatgcagttg
cgtaccttgacgtttgccgtgtcgatggttgttgccggcgccggcgtggcgcaggaggct
ggcgggcgcacccgcttcattctggcggcaagctggcagccggccttttgccagacgaac
cagaagaaagccgaatgtgcgagccagaccggcgagcgccccgacgcgacgaacttttcg
ttgcacggactttggccgatgcggcaggattattgcggcgtgagcgccgagcagaaggcc
gccgacaaggatggcgactggaacaagctgccggaggtcacgcttgcggccgagacgaag
acggcgctggcaaaggcgatgcccggcacgcaatccggcctggaacggcatgaatgggtg
aagcatggcacctgcacgaagatgagcgccgacgactatttcggcgtcggcgtgcatctc
gtgggcgcgctcaacgcgtcggcggtgcgcgatcttttcgctgccaatatcggcaagccg
gtcaaggccgacgcgatcaaggcggctttcgacaagagcttcgggccgggtgccggcgac
cgcgtcaagatgagttgccggcgggccggcaatgtcaggatgatcagcgagctgacgatc
gggctttcggaagccgccggggcggcatcggcgaaaactaccggcctcgccgacctgatc
cagggcgctggaaaaacgtcgttcggctgtgacgagggcgtcgtcgacgctgcgggcttt
tga
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