Rhizobium johnstonii: RL4555
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Entry
RL4555 CDS
T00402
Name
(GenBank) putative 3-isopropylmalate dehydratase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00290
Valine, leucine and isoleucine biosynthesis
rle00660
C5-Branched dibasic acid metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01210
2-Oxocarboxylic acid metabolism
rle01230
Biosynthesis of amino acids
Module
rle_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
RL4555
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
RL4555
Enzymes [BR:
rle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
RL4555
4.2.1.35 (R)-2-methylmalate dehydratase
RL4555
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
CAK10039
RhizoBase:
RL4555
UniProt:
Q1MAJ9
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All DBs
Position
4834364..4835773
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AA seq
469 aa
AA seq
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MSAPRTLYDKIWDDHLVDEQADGTCLLYIDRHLVHEVTSPQAFEGLRMTGRKVRAPEKTL
AVVDHNVPTSPDRHLGIKNEESRIQVEALATNAAEFGVEYYSASDKRQGIVHIVGPEQGF
TLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPH
VTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRALSMEGRMTVCNMTIEGGARAGLIAPDE
KTFEYIKGKPRAPKGEALEQAIAYWKTLQTDEGAHYDRVVVLDAASLPPIVSWGSSPEDV
ISVQGIVPNPDDIPDETKRTSKWRALDYMGLKPGTKMTDITLDRVFIGSCTNGRIEDLRE
VAKVVEGKTVAPTVDAMIVPGSGLVKEQAEAEGLDKIFKAAGFDWREPGCSMCLAMNDDR
LKPGERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDIREWN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccgcgtaccctctacgacaagatctgggacgatcatctggtcgacgaacag
gcagacggcacctgtcttctctacatcgaccgccacctggtccacgaagtgacctcgccg
caggctttcgaaggcctgcgcatgaccggccgcaaggttcgcgcgccggaaaagacgctc
gccgtcgtcgaccataacgttccgacctcgcccgaccgccatctcggcatcaagaacgag
gaaagccgcatccaggtggaagcgctggcgaccaatgccgccgaattcggcgtcgaatat
tattcggcaagcgacaagcgccagggcatcgtccacatcgtcggtccggaacagggcttc
accctgcccggcatgacaatcgtctgcggcgacagccacacctcgacgcatggcgccttc
ggcgcgctggcgcacggcatcggcacctccgaggtcgagcatgtgctggcgacccagaca
ctgatccagaagaaggcaaagaacatgctggtgcgggtcgacggccagcttccgccgcac
gtcaccgccaaggacatcatccttgccatcatcggcgagatcggcaccgccggcggcacc
ggccacgtcatcgaatttgccggcgaagcgatccgcgcgctgtcgatggaaggccgcatg
accgtctgcaacatgacgatcgaaggcggcgcccgcgccggcctgatcgcccctgacgaa
aaaaccttcgaatacatcaagggcaagccgcgcgcgccgaagggcgaggcgctggaacag
gcaatcgcctactggaagacgctgcagaccgacgagggcgctcattacgaccgtgtcgtc
gtgctcgacgccgccagcctgccgccgatcgtttcctggggctcttcgcccgaggatgtc
atctccgttcagggcatcgttccgaacccggatgacattccggacgaaaccaagcgcacc
tccaagtggcgcgcgcttgactatatgggcctgaagccgggcacgaagatgaccgacatc
acgctggaccgcgtcttcatcggctcctgcaccaacggccgcatcgaggatctgcgcgaa
gtcgccaaggtcgtcgaaggcaagacggttgccccaaccgtcgacgcgatgatcgtgccg
ggttccggcctcgtcaaggaacaggcggaagccgaaggcctcgacaagatcttcaaggcc
gccggtttcgactggcgcgagccgggctgctccatgtgccttgcgatgaacgacgaccgt
ctgaagccgggcgaacgctgcgcttcgacctcgaaccgcaacttcgaaggccgccagggc
ttcaagggccgcacgcacctcgtctcgccggcaatggccgccgcagccgcgatcgccggg
cacttcgtcgatatccgcgagtggaactga
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