Rhizobium johnstonii: pRL110362
Help
Entry
pRL110362 CDS
T00402
Name
(GenBank) putative GntR family transcription regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rle03000
]
pRL110362
Transcription factors [BR:
rle03000
]
Prokaryotic type
Helix-turn-helix
GntR family
pRL110362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_Crp_2
RP-C
SSL_N
HTH_CodY
HTH_41
HTH_28
HTH_11
HTH_29
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAK03315
RhizoBase:
pRL110362
UniProt:
Q1M624
LinkDB
All DBs
Position
pRL11:391476..392198
Genome browser
AA seq
240 aa
AA seq
DB search
MKANSSDRPVIRPLPVMDRARQVTDALADYVEEARLKAGDRLPAERELMAALGVGRSTIR
EAIRHFQALGVIETRKGSGTYLLKPVSRATIHMPLSLDTVHLRDVLLQTLEVRRGIECEA
GMVAARRRTSTDLVVIEEKLDAMERVHLEKGTSGPEDLAFHLAVYDSTHNPLFRQLLEQM
RETFERFWEHPFDRQDFARRSFPFHRTLFDAIAAGDPEAARAETLKILDIVEEDIKEMSK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaatagcagcgacaggccggtgatccggccgcttccggtcatggaccgcgcg
cgtcaggtgaccgatgcgttggcggattatgtcgaggaagccaggttgaaggcgggcgat
cggctgccggccgagcgcgaactgatggcagcccttggcgtcggccgctcgaccattcgt
gaggcgatccgccatttccaggcgctcggcgtcatcgagacgcgcaagggcagcggcacc
tatctgctgaagccggtttccagggcgacgatccacatgccgctgtcgctcgacacggtt
catctgcgcgacgtgctgctgcagacgctggaggttcgtcgcggcatcgaatgcgaggcg
ggcatggtcgcggcacggcggcgcacgagcacggatctcgtcgtcatcgaggaaaagctg
gatgcgatggaacgtgtgcacctggagaaaggcacctccgggccggaggatctggccttc
catctcgccgtctacgactccacccacaatccgctgtttcgccagcttctcgagcagatg
cgcgagaccttcgagcgcttctgggagcatcccttcgaccggcaggatttcgcacgccgg
tcctttccctttcatcgtacccttttcgacgcaatcgctgccggggatcccgaggcggcg
cgcgccgaaacattgaaaattctcgatatcgtcgaggaagacatcaaggaaatgtccaaa
tga
DBGET
integrated database retrieval system
