KEGG   Rhizobium johnstonii: pRL120628
Entry
pRL120628         CDS       T00402                                 
Symbol
gabD5
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP+]
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
rle  Rhizobium johnstonii
Pathway
rle00250  Alanine, aspartate and glutamate metabolism
rle00310  Lysine degradation
rle00350  Tyrosine metabolism
rle00650  Butanoate metabolism
rle00760  Nicotinate and nicotinamide metabolism
rle01100  Metabolic pathways
rle01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:rle00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    pRL120628 (gabD5)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    pRL120628 (gabD5)
   00310 Lysine degradation
    pRL120628 (gabD5)
   00350 Tyrosine metabolism
    pRL120628 (gabD5)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    pRL120628 (gabD5)
Enzymes [BR:rle01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     pRL120628 (gabD5)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     pRL120628 (gabD5)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     pRL120628 (gabD5)
SSDB
Motif
Pfam: Aldedh
Other DBs
NCBI-ProteinID: CAK12338
RhizoBase: pRL120628
UniProt: Q1M3I6
LinkDB
Position
pRL12:complement(684379..685848)
AA seq 489 aa
MENRMNGLRDSSLLRQQGLIDGEWRGAAAGHTIEVIDPATQHVLGTVPDMDGADTRAAIV
AAEKAFGPWRAKTNAERGALLEAWHDLMLDNIEDLALILTREQGKPLTEARGEIRYGASF
IRWFSEEARRIGGTTIPSPTADRRIVVLKEPVGVSAIITPWNFPNAMITRKVGPALAAGC
TVVVKPSDLTPFSALALGVLAERAGIPKGVINIVTGMPAGIGDELMANQTVRKISFTGST
RVGSLLMRGAADSVKRLSLELGGNAPFIVFDDADLDLAVEGAIASKFRNGGQTCVCANRL
LVQSGVYEAFAAKLSARVSAMKVGAGTDAGTDIGPMINKAAIEKIRRHVDDAVEKGARIL
ATAGFMPEGDQYAVPMVLGGATTEMQLASEETFGPVAPLFRFDNEEEAIRIANATPFGLA
AYFYTGSLKRSWRVAEALEFGMVGLNTGAISTEVAPFGGVKQSGLGREGAQCGIEEYLEM
KSFHIGGLA
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggagaacagaatgaacggattgagggatagcagcctgcttcgtcagcagggactgatc
gacggagaatggcggggggccgcggccgggcacacgatcgaggtgatcgatccggcgacc
cagcatgtgctgggcacggtacccgacatggacggagccgatacgagggcggcaatcgtg
gcggcggaaaaggcctttggtccatggcgcgcaaagaccaatgccgagcgcggcgcattg
ctggaagcctggcacgatctgatgctcgacaatatcgaggatctggcgttgatcctcacc
agggagcagggcaagccgctgacggaagcgcgcggcgaaatccgctatggcgcctcgttc
atcagatggttttccgaggaggcgcgccgcatcggcggaacgaccattccctcgccgacg
gcggaccggcggatcgtcgttctgaaggagcctgtcggcgtgtcggcgatcatcacgccg
tggaattttccgaatgcgatgatcacccgcaaggtcgggccggcgctcgccgcaggctgc
accgtcgtcgtcaagccatcggacctgacccccttttcggcgctggcgctcggtgtattg
gcggagcgcgccggcatcccgaagggggtgatcaatatcgtcaccggcatgccggccggc
atcggcgacgaactgatggcgaaccagaccgtgcgcaagatctctttcaccggctcgacc
cgcgtcggctcgctgctgatgcgcggcgcggccgacagcgtcaagcggctcagcctcgaa
ctcggcggcaacgcgcccttcatcgtcttcgacgatgccgatctcgatctggccgtggaa
ggcgcaatcgcctcgaaattccgcaatggcgggcagacctgcgtctgcgccaaccggctt
ctcgtccagtccggcgtctacgaggcctttgccgccaaactttccgcgcgcgtatcggcc
atgaaggtcggggccggcacggatgcaggcaccgatatcgggccgatgatcaacaaggcg
gcgatcgagaagatcaggcgacatgtcgacgatgcggtggaaaagggagcgaggatcctc
gccacggcaggtttcatgcctgaaggcgatcaatatgcggtgccgatggtgcttggcggt
gcgacgaccgagatgcagctcgccagcgaagagaccttcggacctgttgccccgcttttc
cgtttcgacaacgaggaagaggcgatccgcattgccaacgccacgcccttcgggcttgcg
gcctatttctacaccgggagcctgaaacgctcctggcgtgtcgccgaagcgctcgaattc
gggatggtcggcctgaacacaggggcgatctcgaccgaggtcgctcccttcggcggcgtc
aaacaatccggtcttggccgcgagggcgcgcagtgcggcatcgaggaatatctcgaaatg
aagagcttccacatcggcgggctcgcctga

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