Rhizobium johnstonii: pRL120678
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Entry
pRL120678 CDS
T00402
Name
(GenBank) putative alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
pRL120678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
pRL120678
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
pRL120678
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
pRL120678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
GHL6
Motif
Other DBs
NCBI-ProteinID:
CAK12387
RhizoBase:
pRL120678
UniProt:
Q1M3D8
LinkDB
All DBs
Position
pRL12:728541..729863
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AA seq
440 aa
AA seq
DB search
MTSSERQPENPASGGAEKHAWFSQDRLGMFIHWGLYALGARHEWLKNREELTDEHYQRYF
DNFDPDLYDPKEWARRARLAGMKYVVVTTKHHEGFCLWDSKVTDYKAPNTPCGKDLLAPL
VEAFRAEGLKIGFYYSLLDWHHPDFPIDVHHPLRNHPDAKALNAGRNIANYAAYMREQVR
ELLTGFGRIDIIWFDFSYPGREYRGLPGKGRADWESERLVELVRDLQPGIIVNNRLDLPP
GSLPDVTTPEQYTPRVAPAITSQGVLWEACHTFSGSWGYHRDEDTWKSPEQIIQLLIDSV
ALGGNLLMNVGPTGRGTLDARAISALEVYQNWMAVNGRSIYGAGPSRYPVPAGCRYTQRG
NRLYLHVYNWPYRHIHIEGLADRISYAQFLHDASEVHWLSHAKDVDSNIGVTVPEGMITL
ELPVRRPDVTVPVIEIVLKA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagttcggaacgccagccggaaaatccggcatcgggaggggcggagaaacacgcc
tggttcagccaggatcgcctgggcatgttcatccattggggcctctatgccttgggagcc
cggcacgagtggttgaagaaccgcgaagagctgaccgacgagcattaccagcgctatttc
gacaatttcgatcccgatctctacgatcccaaggaatgggcccgccgggcgcgccttgcc
ggcatgaaatatgtcgtggtgacgaccaagcatcatgaaggcttctgcctgtgggacagc
aaggtgacggactacaaggcgccgaacacgccctgtggcaaagatctgctcgcgccgctt
gtcgaagccttccgcgccgaagggctcaagatcggcttctactattcgctgcttgactgg
caccatcccgatttcccgatcgacgttcaccatccgctgcgcaaccatcccgacgccaag
gccctgaatgccggccgtaacatcgccaactacgcggcctatatgcgcgaacaggtgcgc
gagcttctgaccggcttcggccgcatcgacatcatctggttcgatttcagctatcccggg
cgcgaatatcgcggcctgcccggcaaggggcgcgccgattgggagagcgagcggctggtc
gagctggtgcgcgacctgcagcccggcatcatcgttaacaaccgcctcgatctgccgccc
ggcagcctgcccgacgtaacgacgccggagcaatatacgccgcgcgtggcccccgccatc
accagccagggggtactctgggaagcctgccataccttcagcggctcctggggttatcac
cgcgacgaagatacctggaaaagcccggaacagatcatccagctgttgatcgattccgtc
gcactcggcggcaacctgctgatgaatgtcggcccgaccggccggggcacgctcgatgcg
cgcgccatcagcgcgctcgaggtctatcagaactggatggccgtcaacggacgttccatc
tatggggcagggccatcccgctatccggtgccggccggctgccgctatacccagcgcggc
aaccgcctttatctgcatgtctacaattggccttaccgccacatccacatcgaaggtctc
gccgacaggatctcttatgcgcaattcctgcacgacgccagcgaggtgcactggctgagc
catgccaaagatgtggattccaatatcggcgtgacggtgccggaaggcatgatcacgctc
gaactgccggtccggcgcccggacgttaccgtgccggtgatcgagatcgtcctgaaggcg
tga
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