Roseobacter litoralis: RLO149_c023460
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Entry
RLO149_c023460 CDS
T01572
Name
(GenBank) putative DNA polymerase III chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
rli
Roseobacter litoralis
Pathway
rli03030
DNA replication
rli03430
Mismatch repair
rli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLO149_c023460
03430 Mismatch repair
RLO149_c023460
03440 Homologous recombination
RLO149_c023460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rli03032
]
RLO149_c023460
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c023460
Enzymes [BR:
rli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLO149_c023460
DNA replication proteins [BR:
rli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RLO149_c023460
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RLO149_c023460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AEI94316
UniProt:
F7ZBD0
LinkDB
All DBs
Position
complement(2406407..2406874)
Genome browser
AA seq
155 aa
AA seq
DB search
MGKAMFYHLTRRPMEDTLMMLLGKATGAGWRVVVRGTRPDRMAWLDEKLWQGADDSFLPH
GLAGGAHDARQPILLSTTPDIPNAATCVMSVDGADVAADEVAQLDRVCVLFDGNDPQALD
IARGQWSTLKKAGAAAEYWSEESGSWQKKAETKAG
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaggccatgttctatcatttgacgcggcgtcccatggaagacacgctgatgatg
ttgcttggcaaagcaacaggtgcgggctggcgtgtggtcgtgcgcggcacgcggcctgac
cggatggcatggcttgatgaaaaactgtggcagggggcggacgacagctttctgccgcat
ggtctggcgggcggtgcgcatgatgcgcgtcagccaattctgctgagcacgacgccggac
attccgaatgcggccacctgcgtcatgtcggttgacggggccgatgtcgcagcggatgag
gtcgcacaattggaccgcgtttgcgtgctgtttgatggcaacgacccgcaggcgcttgac
atcgcacggggccagtggagcacgttgaaaaaggccggagccgctgcggaatactggtcc
gaggaaagtgggtcttggcagaaaaaggccgaaaccaaagccggttaa
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