Ruminococcus lactaris: NQ541_07775
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Entry
NQ541_07775 CDS
T08757
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rlr
Ruminococcus lactaris
Pathway
rlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQ541_07775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlr03400
]
NQ541_07775
Enzymes [BR:
rlr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NQ541_07775
DNA repair and recombination proteins [BR:
rlr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ541_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
HHH_5
AAA_22
UvrD_C
Helicase_RecD
T2SSE
NTPase_1
UvrD-helicase
nSTAND3
AAA_5
PhoH
HHH_2
HerA_C
SRP54
AAA_28
AAA
FtsK_SpoIIIE
Rad17
AAA_12
TrwB_AAD_bind
AAA_16
DEAD
MeaB
DAO_C
Motif
Other DBs
NCBI-ProteinID:
UWP64662
LinkDB
All DBs
Position
complement(1654871..1657078)
Genome browser
AA seq
735 aa
AA seq
DB search
MEKVTGYVEHIVFRNEENGYTVFHLENEDGEVTCVGNLNFITEGEMLELEGEYVNHSVYG
NQLKVSAYRVKEPEDLVSIERYLGSGAIKGIGQTMASRIVKKFREDTFRIIEEEPERLAE
IKGISERKAMEIASQMEEKKDMRKSMIYLQKYGISTKLAAKIYQRYGMKVHQILEENPYR
LADDIEGVGFRTADEIAARIGIHTDSDYRIRSGLFYILQQAVAEGHIYLPEELLLRRAKV
LLGIEIEDIEKYIMDLCMERKTVMKEKDGKVIVYPAHYYYMELNTAKMLNDLDIDCQMPE
DMMEKRLRAVEEKEKIELDPLQHKAVIESIKHGLLILTGGPGTGKTTTINTMIQFFESEG
LSILLAAPTGRAAKRMTEATGYEAQTIHRLLEVNGNPEEESTGGFLRNRENPLEADVIII
DEMSMVDLNLMHALLSAVVQGTRLILVGDVDQLPSVGPGSVLKDIISSERFHVVTLTKIF
RQAGESDIIMNAHKINAGEPVELNKKSRDFFFVKCDEADTIIGGIIALIQRKLPQYVQAH
PNEIQVMTPTRKGLLGVERMNVILQKYLNPADEKKTEREINGRLFREGDKVMQIKNNYQL
EWEICTRFGLTVDKGMGVFNGDMGVISEINEYKETVEVEYDEGRKVKYGFDMVDELELAY
AITVHKSQGSEYPAVILPLLPGPKLLYNRNLLYTAVTRAKKCLTIIGSDTTFQEMIRNKS
EQERYTSLAERIGEF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagtaacaggatatgtagagcacatcgtgtttcggaatgaggaaaatggatat
acggtatttcatttggaaaatgaagacggagaagtaacgtgtgtggggaatctgaatttc
atcacagaaggagaaatgttggaattagaaggagaatacgtgaatcacagcgtatatggc
aatcagttaaaagtttcggcatatcgcgtgaaagaaccggaagatctggtttccatcgaa
cgttatcttggatctggtgcgattaagggaatcggtcagaccatggcttcaaggatcgta
aaaaagttcagggaggatacattccgtattatagaagaagaaccggaacggctcgcagag
atcaagggaatcagtgaacggaaggcgatggagatcgcttcgcagatggaagaaaaaaag
gatatgagaaaatccatgatctatctgcaaaaatatggaatttcgaccaagcttgcagca
aagatctatcaacggtatggaatgaaggtgcatcaaattctggaggaaaatccgtatcgg
cttgcagatgatatcgagggagtcggattcagaaccgcagatgagatcgcggcaagaatc
gggattcatacggattcagattacaggatccggagtggattgttttacattttgcagcag
gcagttgcagaggggcatatctatctgcctgaagaattacttttacgcagggcaaaggtt
ctgcttggaattgaaatagaagatattgaaaagtatattatggatctgtgcatggagcgg
aagaccgtgatgaaagagaaagacggaaaagtgattgtctatcctgcacattattattat
atggaactgaatacggcaaaaatgctcaacgatcttgatattgattgccagatgccagaa
gatatgatggaaaaaagactgagagctgtggaagaaaaggaaaagatagaacttgatccg
ctgcagcataaagcggtgatcgagtcgatcaagcatggacttctgatcctgaccggaggt
ccgggaacaggaaagactacgacgatcaatacaatgatccagtttttcgagagcgaggga
ttgagcattcttctggcggctccgacgggacgtgcggcaaagcgtatgactgaggcaacc
ggatatgaggcacagacgatccacagactgctggaagtgaatggaaatccagaggaggag
agtacaggcggatttttgagaaatcgggagaatccactggaggcagatgtgatcattata
gatgaaatgtctatggtggatctgaatctgatgcatgcattattgtctgcagtagtacag
ggaacaagactgatcctggtaggagatgtggatcagctcccatccgtcggaccgggaagt
gttctgaaagatattatttcttcagaacgatttcatgttgtgacgctgacaaagattttc
cggcaggcaggagagagtgatattatcatgaatgcacataagatcaatgcaggagaaccg
gtagaattaaataaaaagagcagagattttttctttgtcaaatgtgatgaggcagatacg
atcatagggggaatcattgcattaatccagagaaaactgccgcaatatgtgcaggcacat
cccaatgagatccaggtgatgacaccgacaagaaaaggtcttctgggagtagaacgaatg
aatgtgatccttcagaaatacctgaacccggcagacgaaaaaaagacggaacgggagatt
aacggaaggctgttccgtgaaggagacaaagtgatgcagataaagaataattatcaactg
gaatgggaaatctgtaccaggtttggtctgacggtagataaaggaatgggtgttttcaac
ggtgacatgggtgtgatctcagaaatcaatgagtacaaagaaacggtagaagtagagtat
gatgaaggaagaaaagtgaaatatggatttgacatggtggatgagctggaactggcatat
gcgatcacagtacataaatcccagggaagtgaatatccggcagtgattcttcctcttttg
ccggggcctaaattattatataacagaaatcttctgtatactgctgttacgagagccaag
aaatgtcttacaattatagggagtgatacaacatttcaagaaatgatcaggaacaaaagc
gaacaggaaagatataccagtcttgcagaacgtatcggagagttctga
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