Rhizobium lusitanum: HB780_01165
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Entry
HB780_01165 CDS
T07787
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
rls
Rhizobium lusitanum
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
Bep_C_terminal
AAA_19
Viral_helicase1
UvrD_C_2
PhoH
AAA_11
AAA_22
SH3_13
AAA_16
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QND44441
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Position
p_2:complement(224886..228188)
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AA seq
1100 aa
AA seq
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MAITHFSVSIVSRGDGRSAVLSAAYRHCAKMDYEREARTIDYSRKEGLLHEEFVLPADAP
QWARKLIADRSVSGASEAFWNRVEAFEKRIDAQLAKDVTIALPLELTHKQNVALVRDFVE
MHILSKGMVADWVYHDNPGNPHIHLMTTLRPLAEGGFGPKKVAVVGEDGQPLRNTAGKIV
YELWAGDSKDFNAFRDAWFERQNHHLALNGVALQVDGRSYEKQGIELRPTIHLGVGAKAI
ERKAVVEGERPSLERLDLQEERKADNLRRIQARPEIVLDLVSREKSVFDERDVAKVLHRY
IDDQGIFQQLLACILQSPEILRLQRDTIEFATGQRLPARYTTRELIRLEAEMARRSLWLS
ERKTHGVSEPVLEATFARHARLSAEQRVAIEHVAGPARIAAVVGRAGAGKTTMMKAAREA
WELAGYRVVGGALAGKAAEGLEREAGIQSRTLTSWELRWKRGRDTLDANTVFVMDEAGMV
ASRQMAGFIEAVVRSGAKLVLVGDPEQLQPIEAGAAFRAIADRVGYAELETIYRQREDWM
RKASLDLARGRVGEALITYRSEGKVLGSELKAQAVEHLVADWNRDYDPSKSMLMLAHLRR
DVRMLNVMAREKLVERGILSEGHSFRTADGIRHFDAGDQIVFLKNEGSLGVKNGMIGRVV
EAAPNRISVVIGEGDQCRQVSVEQRFYNDLDYGYATTVHKSQGATVDRVKVLASLSLDRH
LTYVAMTRHREDLALYYGRRSFAKAGGLTEILSRRNAKETTLDYERGGLYRPALAFAENR
GLHVVHVARTLLRDRLDWTLRQGSKLADLAVRLRAAGERLGLLQTPKTQTNKETRPMVPG
VKLFPVAMSDAVDRKASDDPAVKKQWEEVSTRFRYVFADPETAFRAMNFDAVLADSQVAS
QTLNKLAADPSSIGPLKGKTGVLSSKSDREARRVAEVNVPALKRDIETYLRIREVAVQRL
ESEEKTQRQRVAIDIPALSPTAQSVLERVRDAIDRNDLLAAMGYALSNREAKAEIDDFGK
AVSERFGERTLLTNAARNPNGQLFDKLSEGLAPQEKERLKEAWPVMRTVQQLSAHERAVA
SLKQVEDLKLAQRQTPVIKQ
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcacccacttctcagtcagcatcgtcagccgcggcgacggccgcagcgcggtg
ctgtcggcggcttaccggcactgcgcgaagatggactacgagcgtgaagcgcgcaccatc
gactactcccggaaggagggcttgctgcacgaggagttcgtgcttcctgcagatgcgccg
caatgggcacggaagctgatcgccgaccgttcggtgtccggagcttcggaggccttctgg
aacagggtcgaggccttcgagaaacggatagatgcccagcttgccaaggacgtgaccatt
gctctgccgcttgaactcacgcacaaacagaacgtcgcgctcgtccgggacttcgtggaa
atgcacatcctgtcgaaaggcatggtggccgactgggtctaccacgacaatccaggcaat
ccgcacatccatctgatgacgacgctgcggccgctggccgagggcggctttgggccaaag
aaggttgcggtcgtcggcgaggacgggcagccgctgcgaaacaccgccggcaaaatcgtc
tacgagctatgggctggcgacagcaaggacttcaatgcgtttcgcgacgcctggttcgaa
cgtcagaaccatcatctggcgctgaacggggtcgcgctacaggtcgacggccggtcctat
gagaagcagggtatcgagctccgaccgaccatccatctcggcgttggcgccaaggcgatc
gagcggaaagccgtggtggaaggggagcgtccttcgctggagcggctcgacctgcaggag
gagcgcaaggccgacaacctgcggcgcattcaggcgcgcccggagatcgtgctcgatctc
gtctcccgtgagaagagcgtcttcgatgaacgcgacgtggccaaggtgctgcatcgctat
atcgatgatcagggcatcttccagcagcttctggcgtgcattctccaaagcccggaaatc
ctgcgtctgcagcgcgacacgatcgagttcgcgaccggccagaggctgccggcgcggtac
acgacgcgagagctaatccggctcgaagcggagatggcaaggcgctcgctctggctctcc
gagcggaaaacgcatggtgtatctgagccggtcctggaggccacgttcgcgcgccatgcc
cgcctttcggctgaacagcgagtagcgatcgaacatgtcgcaggtccggcgcgcatcgcc
gctgtcgtcggtcgggccggtgcgggcaagaccacgatgatgaaagctgcccgagaagct
tgggaactcgccggataccgtgtcgtcggtggagctcttgccggtaaggcggcagaggga
ctggagagagaggccggcattcagagccgcacgctcacgtcatgggagctgcgctggaag
cgaggccgcgacacgctggacgcaaacaccgtcttcgtcatggacgaggccggcatggtc
gcctcgaggcagatggccggcttcatcgaggccgtcgtcagatcaggcgccaagctcgtg
cttgtgggcgatcccgagcagctccaaccgatcgaagcgggtgccgcgtttcgcgccatt
gccgatcgtgtcggatatgccgaactcgaaaccatctatcgccagcgcgaggactggatg
cgcaaagcctcgctcgacctggcacgcggccgcgttggcgaagcgctcatcacttatcgt
tcagagggcaaggtgcttggctcggagctgaaagctcaggccgtcgaacacctggtcgcc
gactggaaccgcgactacgatccatcaaaatccatgctgatgctcgcgcatctgcgccgc
gacgttcgcatgctcaatgtcatggcgcgcgagaagctggtcgagcgaggcattctcagt
gaggggcattccttcaggactgccgacggtatccgccatttcgacgctggcgaccagatc
gtcttcctcaagaacgaaggttcgctcggcgttaagaacggtatgatcggccgtgtcgtc
gaggcagcgccgaaccgcatttctgtcgtgatcggcgagggcgatcagtgtcgccaggtg
tcggtcgagcagcgcttctacaacgatctcgattatggctatgcgaccacggtccacaaa
agccagggcgccaccgtcgacagggtgaaggtactcgcgtccctctcgctggatcgccat
ctgacctatgtcgcgatgacccgccatcgcgaggacttggcactctattatggccgtcgt
tcctttgccaaggcaggcggtctgacggagatcctgtcgcgcaggaatgccaaggagacc
acgctcgactacgagcgaggcggcctctaccgcccggcgctcgcctttgccgaaaaccgt
gggctgcacgtcgtccatgtcgcccggaccctgctgcgcgaccggcttgactggacgctg
cgccagggctcgaaacttgctgatcttgcagttcgccttcgagcagccggcgaacgcctc
ggcctgttgcagaccccaaaaactcaaacgaacaaggagacccgcccgatggtgccaggc
gtaaaactgttcccagtagcgatgagcgacgccgtcgaccggaaagcttcggacgatccc
gctgtgaagaagcagtgggaagaggtctcgacgcggttccgctatgtgttcgccgatccg
gagaccgccttccgggcgatgaacttcgacgcggtccttgccgacagccaagttgcgtcg
cagacgctgaacaagcttgccgcggatccgtcgtcgatcggcccgctcaagggcaagacc
ggggttctctccagcaagtctgatcgcgaggcccgccgcgtcgccgaggtcaacgtgccg
gcactgaaacgcgacatcgaaacctatctgcggatacgcgaagtcgccgtgcagcggctc
gagagtgaggagaagacacagcgccagcgcgtcgcgatcgatatcccggcgctgtcgcct
acggcgcagagcgtgctggaacgggtgcgcgacgcaatcgaccgcaacgatcttctcgca
gcgatgggatacgcccttagcaaccgcgaagccaaggccgagatcgatgattttggcaag
gcggtatccgaacggttcggtgagcggaccctgctgacgaatgccgcacgcaatcccaac
ggccagctgttcgacaagctctcagagggactggcacctcaggagaaggagcggctgaaa
gaagcctggccggtgatgcgcacagttcagcagttatcggctcatgagcgcgcggtggca
tcgctgaagcaggtagaagacttgaagctcgctcagcgtcagacgccggtgatcaagcaa
tga
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