Rhopalosiphum maidis (corn leaf aphid): 113548322
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Entry
113548322 CDS
T06065
Name
(RefSeq) neurogenic locus Notch protein isoform X1
KO
K02599
Notch 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04320
Dorso-ventral axis formation
rmd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113548322
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
113548322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_3
Ank_2
Ank
Notch
Ank_4
Ank_3
NOD
NODP
Ank_5
EGF_2
cEGF
Plasmod_Pvs28
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
113548322
NCBI-ProteinID:
XP_026804940
LinkDB
All DBs
Position
1:complement(32999623..33048357)
Genome browser
AA seq
2473 aa
AA seq
DB search
MRRRNPGRTFVGTCILLAFWTLAAELDGASGSTGIVSCSPNPCLHGGSCYMKKTGEYACN
CTGLFVGPYCQWKNPCHTGPVPRCQNAGTCAVTQVSPHSPPGFSCQCPLGFTASLCEIPI
SNACDSKPCQNGGTCWLHNIKEHRCNCAPGFTGPNCELEDHCASGPCKNGAECASKDDSY
ECTCAPGFTGTTCSEDIEECSTTEPCVHGQCVNTHGSYACICEPGYTGKNCEMVYVPCDP
SPCMNSGRCMQIDDLNYECKCKSGFRGKNCEENIDDCIPHACLNGGSCVDGVNSYTCSCP
AQWTGESCEMDVDECAMRPSVCHNGATCTNSLGSYNCICVNGWTGQDCSVNIDDCAGAAC
FNGATCIDRVGSFHCQCTYGKTGLLCHLDDACTSNPCHTDAICDTSPINGSYTCSCASGY
KGIDCSEDINECEQGSPCEHDGVCVNTPGSFACNCPQGFTGPRCETNVNECDSHPCKNEG
SCLDDPGTFRCVCMPGFAGTQCEIDVDECEADPCENGGVCTDMINGYKCSCPAGFSGPRC
QINIDDCVSSPCKHGGICHDSIAGYQCECSPGFTGFNCENNINDCLSNPCKHGECIDGQN
SFTCSCHPGYTGLLCQDQLDECASAPCQHGGTCEDLINGYQCRCRAGTSGPNCEVNINEC
VSNPCRNGAKCIDGINKYSCDCLPGFTGLHCEMNVDECASSPCANGGTCVDLVAGWRCEC
PRGYYGPRCLSDIDECASNPCSLNALRCEDGLNQFICHCRPGYTGKRCDIDIDECSSNPC
QHGGVCTDRVNGYTCQCKPGYSGHNCDVNIDDCAINPCKNGGSCIDLVNAYKCVCQLPFT
GSECQSRLDPCTPNRCRNGAKCSPSSNFLDFACECSIGWKGRLCNEDVDECALTAPCRNG
ATCQNTDGSYKCACAPGFQGRDCVINTDECASSPCQNGATCLDGIGDYTCMCSDGFSGRH
CEVDVDECLSQPCLNGATCKQYVNSYTCTCPVGFSGIHCLTNDQDCTDSSCMNGATCVDG
INNYTCICPTGYTGLNCQTRINECDSSPCDNGGTCLDHGKYYTCHCAYGYTGKNCESLVD
WCSGGGGIPQPCENGATCKQIQNLYQCVCQPGWTGKVCDVEMVSCNDASLRKGVRRDALC
HNGGVCEDIGNSHRCHCADGYSGSYCTKEINECDSAPCQNGATCRDLVAGYSCQCPRGFQ
GQNCELNVDDCHPNPCQNGGTCRDLINSFSCSCPPGTLGIICDINIDDCSPDACHNNGTC
IDRVGGFDCRCPAGFVGHRCEGDINECLSNPCDPYGTLDCVQLVNNFHCNCRAGYMGRHC
ETKVNFCESSPCQNGGVCSQVEGGHTCVCPKEFSGRNCEFFGVDCDSSPCQGDGLCHSLD
HGGYQCECPPGTAGIHCEVDSYNECESNPCEHDGTCQNKLGDYACFCPIYWSGKNCNIYD
SKFKGGLGKFPSKSIMTKKDYDWERELAACVTNGCTAKSQDNRCHQECNTAACDFDGGDC
SLGLNPWRNCTTTKNCWQVFADGRCDVECNTPECLYDGRDCERTLMPCNPIYDAYCQSHY
ANGHCDYGCNNAECNWDGLDCEREPPKIAEGAMRLILRMDYHQLLSNLTSFLREVGRELR
ATVRVKQDELTGKQMIFPAESPPGAVVVYLEIDNRKCEITRDVECFSSGTGAAGFLAASA
ASHALSTSFPIYRAEGVGPGSQIPIEQPRSSTALVLTGMFLILVIGLSLGVLISTHRKKA
AGITWFPEGFLRTGSNSSRTSTQRRVPDGQELRTMKQNNMTLSCMDMNSGVMTMGRGAGA
WSDEDAEGDMPPAKRHRPAPILSQPLDNPYDDVWSHCNLNSNDNKATVMYTPPSRETEVN
ERLPGGLTRLMDVTVAGGAGLDTSIDNEDEGEDATTNMISELVSQGAELNATLDKTGETS
LHLAARYARADAAKRLLDMGADVNFQDHTGRTPLHAAVAADAMGAFQILLRNRSTNLNAR
MHDGTTPLILAARLAIEGMVEDLIHADADINIPDNSGKTALHWAASVNNVDAVNILLANN
ANKDAQDDKDETPLFLAAREGSFEACKALLDNFANREIADHMERLPRDVASERLHHDIVR
LLDSHVAHPNAQTMVPVNNNFMSKSQRNRVSRPLVPLPKNTQTTMTNTTTPATEIDLGMC
LFTDSQHMMSAHSNINIPGMKLSNGGNGGGTAKGKKRPKPSNPTSPADSMDSNLSLKRKG
SVKKPPPPLPPSSAMSSTAAAPSNKKPFGLDVTCAGGPNNMDLMALDVSRLYGGAGLPQQ
PPAYEECLSQLPSASQRPMANYGAAMHHQQHQQQQQQQQQQQQPDYRVLHQQMLGMQTSF
QEPSPPHSVVMSPSPGKTRPSLPTSPTHMQALRHATMQAVDPFSQFHHFYGSVQQTPQSL
QPPQSQHAQQYLTPPSDAAPESFPTPSPDSPWHWSSSSPNSNSDWSEGISSPPNNNNNNN
NGHPNKVSDAVYI
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagaaacccaggccggacttttgtcggtacgtgcatactgttggcattctgg
acgttagctgcggaactcgatggagcatcagggtctaccgggattgtgtcatgctcgcct
aacccatgtcttcacggaggttcttgttacatgaaaaagaccggagaatacgcttgcaac
tgtactggactgtttgtcggaccttactgtcaatggaaaaacccctgccacacgggtccc
gtgccccgatgccaaaacgccggaacatgcgctgtcacgcaagtgtcgccacattctccg
cccggattctcgtgccagtgtccgctgggattcaccgcgtccctgtgcgagatacccata
tcgaacgcgtgcgactcgaagccgtgccaaaacggtggcacgtgttggctgcacaacatc
aaggaacatcggtgcaactgcgctcctgggtttacaggaccaaattgtgagttggaagac
cattgcgcttcgggaccgtgcaagaacggagctgaatgcgcttctaaagacgattcttac
gaatgcacgtgcgccccagggttcacgggcacaacgtgctctgaagacattgaggaatgt
tcaacaaccgaaccctgcgtacacggacaatgcgtcaacacacatggatcgtatgcgtgt
atttgcgaaccaggttacacgggcaagaactgcgagatggtatacgtcccgtgcgacccg
tcgccatgtatgaacagcggaaggtgtatgcagatcgacgatctcaattatgagtgcaag
tgcaagtctggttttcggggcaaaaattgcgaggaaaacattgacgattgtataccgcac
gcctgcctgaatggtggctcgtgcgtggatggcgtgaacagttacacgtgctcgtgtccg
gcccaatggacgggtgagtcgtgcgagatggacgtggacgagtgcgccatgcggcccagc
gtctgccacaacggcgcgacatgtaccaattcgctgggatcgtacaattgtatttgtgta
aacggctggaccggacaagactgttcggtaaacattgacgattgcgccggagctgcctgt
ttcaacggcgccacttgtatcgaccgagttggcagcttccattgccagtgcacgtacggc
aagaccggtctcctgtgccaccttgacgacgcgtgcacgtctaacccgtgtcacaccgat
gccatatgcgacacaagtccgatcaatggttcgtacacttgttcgtgtgcttccggctac
aaaggaatcgattgttccgaagacatcaacgaatgtgaacaaggatcgccatgcgaacac
gatggagtttgcgtcaacactcccggatcgttcgcctgcaattgcccacaaggttttaca
gggccgcggtgcgagaccaatgtgaatgagtgcgactcgcatccctgcaaaaatgaagga
tcctgccttgacgaccctggaactttccgatgcgtgtgcatgccagggtttgctggcacg
caatgtgagattgatgtggacgagtgcgaagcggacccgtgcgagaacggtggtgtatgt
actgacatgatcaacgggtacaagtgctcgtgcccagctgggttctcgggaccacgatgc
cagatcaacatcgatgactgcgtgagcagcccgtgcaagcacggtggcatatgtcacgat
tcgatagccggttaccaatgtgagtgttcgccaggcttcacgggattcaactgcgaaaac
aacatcaatgactgtctgtcaaacccgtgcaagcacggcgaatgcatcgacggccagaac
tcgttcacgtgctcctgtcatccgggctatacgggacttctatgccaggaccagctggac
gagtgcgcgtctgcgccttgccagcacggcggcacgtgtgaagacctgatcaatggatat
cagtgccgttgtcgagcaggcacttccggcccgaactgtgaggttaacatcaacgagtgt
gtgtccaacccctgtcggaacggggcgaagtgcatcgacggtatcaacaagtattcttgt
gactgtttgcccggcttcaccggtttgcattgcgagatgaatgtggacgaatgcgccagt
agcccttgtgccaacggcggaacttgcgtggatctagtggctggttggcgttgcgagtgt
cctcgtggttactatgggcctaggtgtttatccgacatcgacgaatgtgccagcaacccg
tgttctttgaatgcgttacgttgtgaggacggcctcaaccaattcatatgccactgcaga
ccgggctatactggcaaacgttgtgatatcgatattgatgagtgtagctcgaacccgtgt
cagcacggcggagtgtgcacggaccgtgtaaacggatacacatgccaatgtaaacccggg
tattctgggcacaactgtgacgtaaatattgatgattgtgccattaacccgtgcaaaaac
ggagggtcgtgcattgatttggtgaacgcttacaagtgtgtctgtcaactaccgttcacc
ggctcggagtgccagagcagattagacccttgtacgcccaacaggtgccgcaacggtgcc
aagtgttcgccttctagtaactttttagatttcgcatgtgaatgttctatcgggtggaaa
ggtcgtttatgcaacgaagatgtagacgagtgtgcattgactgcaccttgtcggaatggc
gccacttgtcaaaacactgacggatcatataaatgcgcttgtgctcctggttttcagggc
cgtgattgtgtaatcaacactgacgaatgcgcttcttcaccttgccaaaacggagctaca
tgtctggatggtattggtgattatacttgtatgtgttctgatgggttttccggccgtcat
tgcgaagtagacgttgacgaatgtctctcacaaccttgtttgaatggagccacttgtaaa
caatatgtaaattcgtacacttgcacatgtcccgttggattttctggcatacactgtcta
actaacgaccaagattgtactgattcatcctgtatgaatggcgccacttgcgtcgatggt
attaacaactacacttgtatatgtccaactggatatactggattaaattgtcaaactaga
ataaacgaatgtgattcttcgccatgcgataatggcggtacatgtctcgatcacggaaag
tattatacatgtcattgtgcgtatggttatacgggcaagaactgcgaatctttggttgat
tggtgcagtggtggtggaggcataccacaaccctgtgaaaacggagcaacctgtaaacaa
attcagaacttataccagtgcgtttgtcaacccggttggacgggcaaggtgtgtgacgta
gaaatggtatcctgtaacgatgcgtcattacgtaaaggggttcgacgtgatgctctatgt
cataatggtggcgtttgtgaagatatcggtaatagtcataggtgccattgtgccgacggt
tattccggtagctattgtacgaaagaaatcaatgaatgcgattcagcaccttgtcaaaat
ggtgcgacgtgtagagatttagtggcaggatactcttgccagtgtccacgtggcttccaa
ggacaaaattgcgaattgaatgttgacgactgtcatcctaatccatgtcaaaatggtgga
acatgtcgtgatttaatcaatagctttagctgttcatgtccaccaggtacactgggtatt
atttgtgatataaacattgatgactgctcacctgatgcttgtcacaacaacggtacttgt
attgatcgtgttggaggatttgactgtcgttgtccagccggttttgttggtcatagatgt
gaaggtgacataaacgaatgcttatcaaacccttgcgatccatatggaacattagattgc
gttcaattagttaacaatttccactgcaactgtcgtgccggttacatgggcagacattgt
gaaactaaagtcaacttctgcgagagcagcccatgccaaaacggtggtgtatgttctcaa
gtggaaggtggccatacatgcgtatgtccgaaagagttttctggaaggaattgtgaattc
tttggcgtagattgtgactctagtccttgccaaggtgatggcttgtgccactcattagat
catggaggatatcaatgtgaatgtccgccgggcacggcaggtattcactgtgaagtcgat
agttacaatgaatgtgaaagtaatccttgtgaacatgacggtacttgtcaaaataaactt
ggagactacgcgtgtttctgtccaatatactggtcagggaaaaattgtaatatttatgat
tccaagttcaaaggaggtctgggaaaattcccatctaaaagcattatgacaaaaaaagat
tacgattgggaacgagagctggctgcttgtgtaaccaacggatgtaccgctaaatctcaa
gataacaggtgtcatcaagaatgtaacacagccgcttgtgatttcgatggtggtgattgt
tctctcggattaaacccttggagaaattgcacaacaaccaaaaactgctggcaagttttc
gctgatggacgttgtgacgtggagtgtaatacacctgaatgtttgtacgacggaagagat
tgtgaaagaactttgatgccttgcaatccaatatatgatgcatattgtcaaagtcattat
gctaatgggcattgcgattatggatgtaataatgctgaatgtaattgggatggtttggat
tgcgaaagagaaccacctaaaattgccgaaggtgccatgcgtctcattttacgaatggac
tatcatcaacttttgtctaatttaacttcgttcttacgagaggttggtcgagagttaaga
gccactgtccgagtgaaacaagatgaattgactggaaaacaaatgatattccccgcggaa
agtcctcctggagctgtcgtggtttatttagaaattgataatagaaaatgtgaaataacc
agagatgtggaatgtttctcgagtggtacaggggctgctggatttttggctgcttcagcc
gctagtcatgctctatcaacatcgtttcctatttatagagcagaaggtgtcggtcctgga
agccaaattccaattgaacaacctaggagtagtacggcgttagtgctgactggaatgttc
ttgatactagttatcggtcttagtcttggagtgttaatatctacgcatcgcaaaaaggcg
gctggtataacatggttcccagaaggattcttacgtactggtagtaatagcagtagaaca
agtacccaaagaagagtacccgatggacaagaacttagaacaatgaagcaaaataacatg
actttgagttgtatggacatgaatagtggtgtgatgaccatgggaaggggtgccggagct
tggtcagacgaagacgccgagggtgatatgcctccagcaaaacgacatagaccagctccg
atattgtcacaacctttagataacccttacgatgacgtttggagtcactgtaatttgaat
tctaacgataacaaggcaactgttatgtacacacctccgtccagggaaacggaagttaat
gagagactccctggtgggttgacgagactaatggatgtgacagtagctggcggtgctgga
ctggatacaagcattgataatgaagatgaaggagaagacgctacaaccaacatgatatca
gaattggtttcgcaaggtgcagaattgaacgccacgctcgataaaaccggtgaaacttca
ttgcatttggctgcaagatatgctagagcagatgctgctaaacgtttgttagatatgggc
gccgatgttaactttcaagatcacactggccggacaccattacatgctgctgtagctgcc
gacgcaatgggtgctttccaaatcttattgaggaaccgttcaacaaatttaaatgctagg
atgcacgatggtacgacaccgttgattctagcagccaggttagccatcgaaggaatggta
gaagacctaattcatgctgacgccgatatcaatataccagataacagtggaaagacagcc
ttgcactgggctgcatcggtcaacaatgtagatgcagtcaacattttgctggccaataac
gccaacaaagacgctcaagacgacaaggacgaaacaccgttattcttagcagctagagaa
ggcagttttgaagcatgcaaagcgcttttggataacttcgcaaaccgagagatcgcagac
cacatggaacggttaccgcgggacgtggccagcgaacggttgcaccacgacatcgttaga
ttgctggattcacacgtggctcaccctaatgctcagacgatggtgcctgttaacaacaac
ttcatgagtaagtcgcagcgaaatcgtgtctcgcggccgttagtgccattacccaagaac
acgcagacgacgatgacaaatacgacgacaccggcgacggagattgaccttgggatgtgt
ttgttcacagactcgcagcacatgatgtcggctcattccaacataaacatacccggcatg
aagttgagcaatgggggcaatggtggcggcacggccaagggcaaaaagaggccgaaacca
tcgaacccgacgagtcctgccgactcgatggactcaaacctgtcgttgaagcggaagggc
agcgtgaaaaaaccacctcccccgttaccaccgtcgtcggccatgtcatccaccgcggca
gcgcctagcaacaagaaaccatttgggttggacgtgacgtgtgccggtggtcccaacaac
atggacctgatggcgttggacgtgtccaggctgtatggcggcgccggattaccgcaacag
ccgcccgcatacgaggagtgcctgtcacagttgccgtccgcgtctcagagaccgatggcc
aattacggtgctgcaatgcaccaccaacagcatcagcagcaacagcaacagcagcagcag
cagcagcaacccgactaccgagtcctccaccagcagatgttaggcatgcagacgtcgttc
caggaaccgtcgccgccgcacagcgtggtcatgtcaccgtcgcccggaaagacgcgaccg
tcgctacctacgtcgcccacgcacatgcaggccctccgacacgccaccatgcaggccgtg
gacccgttcagccagttccatcacttttacggcagcgtccagcagacgccccaatcgcta
cagcctccccagtcgcagcacgcgcagcagtacctgacgcctccgtcggacgcggcaccc
gagagtttcccgacgccgtcgcccgactcgccatggcactggtcctcgtcttcgcctaac
tccaattccgactggtcggaaggcatatcgtcaccgcccaacaacaacaacaataacaac
aacggacacccgaacaaagtgtcggacgccgtttacatttaa
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integrated database retrieval system
