Rhopalosiphum maidis (corn leaf aphid): 113549274
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Entry
113549274 CDS
T06065
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113549274
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmd01002
]
113549274
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113549274
Enzymes [BR:
rmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113549274
Peptidases and inhibitors [BR:
rmd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113549274
Ubiquitin system [BR:
rmd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113549274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
AcMNPV_Orf101
SIR2_2
Motif
Other DBs
NCBI-GeneID:
113549274
NCBI-ProteinID:
XP_026806298
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All DBs
Position
1:41372712..41381704
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AA seq
850 aa
AA seq
DB search
MAKGKNKKRNRQSSNAPVPLNAGDSSDSGELKSQSTNLLKHPCTHVKKAVNVNNVNKCLQ
KIVAQCSECKNKNLEELYICLQCGSFHCSNLDVNHIVKHQNTPRSDSHSIAVNIGSLIII
CNDCGKEILASSSKKLQIIIDSINHMKQVQTAKNKMNDLPIQGCSTEADAQYDKLISENS
LKKCNGVNKSDDDAPSLKKTFELSESITNNVERCKRPRGLTNLGNTCFYNSVLQCLAQTP
FLRKFLLDISESGEPMTIKLDNEDITVHQEKWSSLTENLYTTLQEITNERESTFTPSALL
DSLRKKCKMFIGYSQHDSHELLRHLLDSVRDDDLKRYKRTIVHHYGLSMNVDPSEVDEKK
TAKIKELGKKLQDVLLRPDHVFKGELLSVVQCQTCGHKSEVTESFLDLSLPIAVDKNHPL
SFPRKKDNDVFNQSKHQTKKERKLALKQGRRKKHEHKQFNNKMQDPLAVNNDADIEDNME
IETNEVEMSVWKNENKENPESGYGSEKQPSNVTSPSLSITELTTLMNNTPLADPDRQMDA
DQILDSEKPMDLDSVLPGSPANSPSSPQGSSLDSMRANVSPDYMDVGTDSANENQERNNP
TPNVSDNNSDGLFDDSKSEEDVEDEEEGEFSQECPQATLQPQPKCKDSECSVLTCLNQFT
ASEIMTGNNKVSCERCTEQHKKKTNEDKTIYRQSTKQMLISSPPAILILHLKRFQMCYST
TRKMTRDVSFQWVLDIAPYCSVKCQNKLSQGQNRILYSLYGVVEHNGFLHSGHYLSYVKV
RDPVKDDSYRHSFLEGSKTKPPKVIDGNDDPSHLAPSGTWYCVSDSMVRQVTPNVVQNCQ
AYLLFYERIL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggcaaaaataagaaacgtaaccggcaaagttctaatgctcctgttccactt
aatgctggcgattcgtcagattcgggagaattaaaaagtcaatcaacaaaccttcttaaa
catccttgcactcatgtcaaaaaagcagtcaacgtaaacaatgtaaacaaatgtttacaa
aagattgttgcacagtgttctgaatgtaaaaacaaaaacttggaagagctatacatttgt
ctacagtgtggatcatttcattgttctaatcttgacgtcaaccatattgttaaacatcag
aatactccaagaagtgattctcattctattgctgttaatatcggaagtttaataattata
tgcaacgattgtggaaaagaaatattagcatccagttctaaaaagctacaaataataata
gattcgatcaatcatatgaaacaagtacaaacagctaaaaataaaatgaatgatcttcca
attcaaggttgttctactgaagcagatgcacaatatgataaattaatttcagaaaattct
ttgaaaaagtgtaatggagtaaataaatctgatgatgacgctccatcactaaaaaaaaca
tttgagctatctgaaagtattactaacaatgtcgaacgatgcaaaagacctagaggtttg
accaatttaggaaatacatgcttttataattcagttttgcaatgtcttgcacaaactcca
tttttaagaaagtttttacttgacataagtgaatctggtgaaccaatgaccataaaatta
gataatgaagatattactgtgcatcaagaaaaatggagttcattaactgaaaacttgtat
accactcttcaagagattacaaatgaacgtgaatcgacatttacacctagtgcactttta
gattcattaagaaaaaaatgtaaaatgtttattggctacagtcagcacgattctcatgaa
cttttacgtcatcttttggactctgtgcgtgatgatgacttgaagcgttataaaaggaca
attgtacatcattatggtttatcaatgaatgttgatccaagtgaagttgatgaaaaaaaa
actgcaaaaattaaagagcttggcaaaaaactacaagatgttcttttacgtcctgatcat
gtattcaaaggtgaacttttgagtgttgttcaatgtcaaacctgtggtcataaatcagaa
gtaacagaaagtttcctagacttgagtttgccaatagcagttgataagaaccacccatta
tcatttccacgtaaaaaagataatgatgtttttaatcaatctaaacatcaaacaaaaaaa
gaacgtaaactagcattaaaacaaggaaggcgaaagaaacatgagcataaacaatttaac
aataaaatgcaagatccattagctgtgaataatgatgcggacattgaagacaatatggaa
attgaaacaaatgaagtcgaaatgtcggtttggaagaatgaaaacaaagaaaatccagaa
tctggatatggttcagaaaagcagccttctaatgttacaagtccttctctaagtattact
gaacttactacattaatgaataatactccactggctgatcctgaccgacaaatggatgct
gatcaaatcttagattctgaaaaacccatggatttggattcagtattacctggcagtcct
gcgaatagcccaagttcacctcaagggtcatcacttgattccatgcgtgccaatgtcagt
ccagattacatggatgtcgggacagatagtgcaaatgaaaatcaggagcgtaacaatcct
acaccaaatgttagtgataacaacagtgatggactatttgatgattcaaaaagtgaagaa
gatgtagaggatgaagaagaaggcgaattttctcaagaatgtcctcaagctacattgcaa
cctcaaccaaaatgtaaagatagcgagtgttcagtgttgacttgtcttaatcaatttact
gcctctgaaataatgaccggtaataataaagtttcatgtgagcggtgtactgaacaacac
aaaaaaaaaacaaatgaagataagacaatttatcgccaaagtactaaacaaatgttaatt
agttcccctccagctattttaatattacatttaaaacggtttcaaatgtgttattcaact
acacgtaaaatgacaagagatgtatcatttcaatgggttttggatattgctccttactgc
tctgttaaatgtcaaaacaagttaagccaaggtcaaaaccgaatattatactcgctgtat
ggtgtagtggaacataatggatttttgcatagtggtcattatctttcatacgtaaaagtt
agagatccagttaaagatgatagctatcgacactcatttttagaaggcagtaaaactaaa
ccaccaaaagttattgatggcaatgatgatccttcacatttagctccaagtggtacctgg
tattgtgttagtgatagtatggttagacaagtaacaccaaatgttgttcaaaactgtcaa
gcttacttattgttttacgaacgaattttataa
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