Rhopalosiphum maidis (corn leaf aphid): 113549468
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Entry
113549468 CDS
T06065
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113549468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113549468
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113549468
Spliceosome [BR:
rmd03041
]
Complex A
U2 snRNP components
U2 related factors
113549468
Complex B
113549468
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
113549468
NCBI-ProteinID:
XP_026806588
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All DBs
Position
1:complement(39790857..39800643)
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AA seq
985 aa
AA seq
DB search
MVRSGSDRVHRKRSRSRSRSPRRHRRSSRSRSRSPRHKIHKSIRDRKKSRSPRRSRSPRN
KRKSPERKPEEVPFDPTNPDKETEQKKLELEMQKRRERIERWRAERKKKELDSVKKDVRT
TIMSNLQIPSKKWNLEDDSDEEEEAKNNAEKMIEEEEIDPLDAFMQGVQEEVRKVNKVDG
HRSNLSEKNSLNDLKQNLGVDTTSSGVVIVSGVAKKKDNNTRGELIEQNQDALEYSSEEE
QEDLNVAAASLANKQKKELPKIDHAEMSYLPFRKNFYVEVPEIARMTSEEIEKYKEELEG
VRVKGKGCPRPIKVWAHCGVSKKIMDNLKKHNYEKPTPIQTQAIPAIMAGRDLIGIAKTG
SGKTLAFLLPMFRHIMDQPPLEDTDGPIAIVMAPTRELCMQTGKEARKFTKSLGLRVVSV
YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGF
EPQVMRVIDNIRPDRQTVMFSATFPRQMEALARRILQKPVEVQIGGRSVVAKEVEQHVVI
VEEEQKFMKLLEVLGVYYEKGSCIVFVDTHENADTLLQKLLKASYPCMSLHGAIDQYDRD
STIVDFKSGQIKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFA
YTLVSPDQERFAGDLIRALETSNVSVPESLRTMWLRYQAKQAAEGKQVHTGGGFSGKGFK
FDETEAVMANEKKKLQKAALGLQDSDDEDIEGDIDQQIETMLAPKRIVKEVKASAIGLPN
LTGLMEVNGTPQASERLELAKRLASRIHIAKNLGPDAKGASQQTAEAILKGGLASSQPVI
TAKTVAEQLAAKLNTRLNYQPKDDDGESECGDSPEAGVEEIFRKYEEELEINDFPQQARW
RVTSKEALAQISEYSEAGITVRGTYYPPPKNPPEGERKLFLAIESTDELAVSKAKIEITR
LIKEELLKMQTSAHHMVNKARYKVL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagtggcagcgatagagttcatcgtaaacgctcaagaagtcgttcacggagt
cctcgtcgccatcgtcgtagtagtagatctcgatctcgatcacctcgtcataaaatacat
aaatcaataagagacagaaaaaagtctagatctcctcgtcgttctcggtctccgcgtaac
aaaagaaaatcaccagaacgtaaacctgaagaagtaccttttgatccaaccaatccagat
aaggaaactgaacaaaaaaaacttgaattagaaatgcaaaagcgccgagagcgtattgaa
cgctggagagcagaacgcaaaaaaaaagaattagatagtgtaaaaaaggatgttcgaact
acaattatgtccaacctacaaataccttcaaaaaaatggaatttagaagatgatagtgat
gaagaagaggaagcaaaaaataatgctgagaaaatgattgaagaagaagaaattgatcct
ttagatgcatttatgcagggtgttcaagaagaagtacgtaaagttaataaagtagatgga
catcgaagtaatttatcagaaaaaaattcattaaacgaccttaaacaaaatctaggagtt
gacactactagttcaggtgttgtgattgtgtctggagtagcgaagaaaaaagataataac
accagaggtgaactcattgagcaaaatcaagatgccttagaatattcgtctgaagaagaa
caagaagatttgaatgtagctgcagctagtttagctaataaacaaaaaaaagaattaccg
aaaattgatcatgctgaaatgagttatttaccatttagaaaaaatttttatgttgaagtt
ccagaaatagctcgtatgacttctgaagaaattgaaaaatacaaagaagaattagaaggt
gttcgagtaaaaggaaaagggtgccctcgaccaataaaagtatgggctcattgtggtgtg
agcaaaaagattatggataatttaaaaaaacataattatgaaaaacctactccgatacaa
acacaagctattcctgctataatggctgggcgtgatctcataggtattgcaaaaactggc
agtggcaagactctggcgtttttattgccaatgtttagacacattatggatcaacctcct
ttagaagatactgatggaccaattgctattgttatggctcctacaagagaactttgcatg
cagacgggaaaagaagcacggaagtttacaaagagcttaggattaagagtggtatcagtt
tatggtggtactggaatatctgaacaaattgcagaattaaaacgaggtgcagaaattatt
gtgtgtactcctggccggatgattgatatgttggctgcaaataatggcagagttaccaat
ttaagacgagtaacatatgtagtattagatgaggctgatcgtatgtttgacatgggattt
gagcctcaagtaatgcgagtaattgataatatacgcccagatcgtcaaacggttatgttt
agtgctacattccctcgtcagatggaagctttagctagacgtatattacaaaaacctgtt
gaagtccaaattggaggtagaagtgttgttgccaaagaagttgaacaacatgtagttatt
gttgaagaagaacagaaattcatgaagttgcttgaagttttaggagtctattatgaaaaa
ggaagttgtattgtgtttgtagatactcatgagaatgcagatacgctcctacaaaaatta
ttaaaagcttcctacccatgtatgtcattacatggtgctatagatcaatatgacagagat
agtacaatagttgactttaaaagtggtcaaatcaaattattagttgctacatctgttgct
gccagaggattagatgttaaagatttgatattagtagttaattatgattgtcctaatcat
tatgaagattatgttcatagatgtggcagaactggaagagcaggtaataaaggatttgca
tacacattagtttcacctgatcaagagagatttgctggtgatctaataagagctttagaa
acgtctaatgtatctgtaccagaatcattacgtaccatgtggctacgttaccaagcaaaa
caagctgcagaaggaaaacaagttcatacaggtggtggttttagtggaaaaggatttaaa
tttgatgaaacagaagctgttatggctaacgaaaagaaaaaattacaaaaggctgctctt
ggtcttcaagactctgatgatgaagacatagaaggagatattgaccaacaaattgaaaca
atgcttgctcctaaaagaatcgtgaaagaagtaaaagctagtgctataggacttccaaat
ctaaccggcttgatggaagtaaatggaactcctcaagcatcagaacgacttgaattagcc
aaacgtttagcttcgcgtatccatattgctaaaaaccttggtccagatgctaaaggtgca
tcacaacaaactgcagaagctatattaaaagggggtcttgctagttctcaacccgttatc
actgctaaaactgttgctgaacaattagcagctaaattaaatactcgactgaattatcaa
ccaaaagatgacgatggcgagagtgaatgtggagatagtcctgaagcaggagtagaagaa
atatttagaaagtatgaagaagaattagaaataaatgatttccctcaacaagctaggtgg
agagttacttctaaggaggccttagcacaaatatcagagtattcagaagcaggaataaca
gtcagaggtacttattatccaccacctaaaaatcctccagaaggagaacgtaaactattt
ttagctattgaaagtactgacgaattagcagtgtctaaagcaaaaatagaaatcactcgt
cttatcaaggaagaattattaaaaatgcaaacttctgcgcatcacatggtcaataaagcc
agatataaagtcttgtaa
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