Rhopalosiphum maidis (corn leaf aphid): 113550586
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Entry
113550586 CDS
T06065
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmd01002
]
113550586
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113550586
Enzymes [BR:
rmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113550586
Peptidases and inhibitors [BR:
rmd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113550586
Ubiquitin system [BR:
rmd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113550586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP47_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
113550586
NCBI-ProteinID:
XP_026808317
LinkDB
All DBs
Position
1:complement(53815271..53826890)
Genome browser
AA seq
1378 aa
AA seq
DB search
MVSVIDDSEADDQAKCLVRKFKNPHDKSTDDDKLECCVDKNLTVRQFINIVAQHYNLDFD
SFSLTFSSFKSDSTLDTGTNDKPKLEADDDRLLIDVGVIFGDGTQNRFVLSENEVEESDQ
AECIVRIPKDMKVFPLTVDQNETAGQLYKRVLELCQAEDINTEYFVLTFNSYNVNTELVK
LMIREDDTRLLSEIGIVYREGVKNRFEISLNILSDNMDNDSSSKSCSPTQDQKIESQYSK
IHPSIRRNGLDSSSVIENNVLEPTSPMPMLTLPSTRMLYNRSTERAYTGYRGLVNQAMTC
YLNSLLQALYMTPEFRNALYKWKFDFDANIDESKSIPFQLQRLFLNLQTSPRHSVETTEL
TRSFGWDSSEAWQQHDVQELCRVMFDALEQEFKNTTHVDLINQLYQGKMIDYVKCQECGI
EKSREDTFLDIPLPIRPFGSTNAYGCIKEALKGFTQPETLDGNNQYFCERCNKKCNAHKG
LKFSKFPYIMTLHLMRFDFDYNTMYRIKLNDKVVFPLKLNLNSFISNNKNGLDKDEALSE
GFPEELFGSGSKCDDSSYTGTDSSSALDEIDQDEDEGIDLSQHRHEDKRGVDLNSENEPI
GPYMYELYAIMIHSGSASGGHYYAYIKDFKTDQWLCFNDQSVSVITMDDIERSFGGGPIR
GYYSGQYTSSTNAYMLMYRQIDHRRNKNAMTQEEFPPHLKELHNLLERKAEEDRQMRERE
RDMYKVPVHLADFMECGVRSWQFDCSGTTTVEQLKAMAIEHFRVTKPCRLVIFNKQDQKV
IENLEDKNNYLVCHLKYSLAFVLLLQMIDTEDNRSVVSTPGYVLMKLFMINLDDNEEDID
VSQPVEIEIELNKEIRDLSNLLYTKYDISRESVLHFAIQSSSKPTLLEESAPCSSIYTNY
VFVFIERHAIEQSVLGHKMKNIITRYDNTILLQFIMPTKDTETLHKLMALYNKNYMNGYN
DDVSMLPLEKQAGVLEVDCDQSNEDNNLVANPEDMCVVAIGSGNGDQSEDSSITDSERTI
KGDAIEDYHMDSPTFEHDPIKVYDQGRSEENWDGTEDDDDDNEFQSNEKYFFKTTKLSDK
TSEDNDEKLYAYVDKRMTVKELKTQLVPYINIPSDFIILNRCKSDTELEELALPSSSLED
LAYSDTIKITMGQALHDGEYRGIIYWIEPQEQTQILFKKMFDWIIKKGTSVLETKRELLV
KLNNTYNIDIPLNRCRLRKKKRDSLMRCYFNEEIWNEDIGQGWEMVILDLKDRSELELNK
TKRLMFVNHIEETTPRVISEMEFVVDIASTTSPNTQLGTEISKKLNIPEDQLEMGYMHGH
STEITWKTSVFNWSFSLSDDNIILYCRNAENTSNKETPSKWRRQRKERSLRIHTMNND
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgttattgatgactcagaagccgatgatcaggcaaaatgcctggtacgaaaa
ttcaaaaaccctcacgataagtctactgatgatgataaattagaatgctgtgttgataag
aatctaactgttcgccagtttattaatattgttgcacagcattacaatttggattttgat
tctttttccttgacatttagttcatttaaatcagattctacattggatactggaaccaat
gataagccaaaattagaagcagatgatgaccgtttattgatagatgtcggtgtgatattt
ggtgatggtactcaaaatcgttttgttttatcagagaatgaagttgaagaaagcgatcag
gctgaatgtattgtccgcatacctaaggatatgaaagtgtttccattgactgtggatcaa
aatgaaactgcaggtcaactgtataaacgtgtattagaattatgtcaagcagaagatata
aatacagaatattttgttttaacttttaattcctataatgtcaataccgaattggtcaaa
cttatgataagagaagatgatacaaggttgctgagtgaaattgggattgtataccgtgaa
ggagtgaaaaatcgttttgaaatatcactgaacattttatcagataatatggataatgat
agttcatctaaatcctgttcccctactcaagatcaaaaaatagaaagccaatattcaaaa
attcatccttcaattcgtcgaaatggtctagattcatcgtctgttatagaaaataatgta
ttagaaccaacatcaccaatgccaatgcttacattaccttctacccgtatgctgtataat
cgttcaactgaaagagcatatacaggatatagaggtttagtaaatcaagcaatgacttgt
tacctaaatagtttattgcaagcattatatatgacaccagaatttcgaaatgctctatac
aaatggaaatttgattttgatgcaaacattgatgagtcaaaatcgataccgtttcaactt
cagagattattcttaaaccttcaaacttcaccaagacatagtgttgaaacaacagaactt
acgcgtagttttggttgggattcaagtgaagcatggcaacagcacgatgttcaagaactt
tgtagagtcatgtttgatgctcttgaacaagaatttaaaaataccactcatgttgatctc
ataaaccagctttatcaaggcaaaatgattgattatgtaaaatgtcaagaatgtggaatt
gaaaaatctagagaagatacatttttagatatacctttacctatacgtccatttggaagt
actaatgcttatggatgtataaaagaagcattaaaaggattcacccagcctgaaacatta
gatggaaataatcagtatttttgtgaacgttgtaataaaaaatgtaatgctcacaaaggt
ctaaaattcagcaagtttccatacattatgacattacacttgatgcgttttgattttgat
tacaacactatgtatcgcattaaattaaatgacaaagttgtgtttcctttaaaactaaat
ttgaacagttttatatcaaataataaaaacggtttagataaagacgaggcactatctgaa
ggatttcctgaagaattgtttggatctggtagcaaatgtgatgatagtagttatactggc
acagacagttcatccgcattagatgaaattgatcaagatgaagatgaaggtattgacctt
agccagcacagacatgaagataaacgtggagtagatttgaattcagaaaatgaaccaatt
gggccatatatgtatgaactttatgctatcatgatacattctggcagtgcgtcaggggga
cactattatgcatatattaaagactttaaaactgatcagtggttatgttttaatgatcaa
tctgtatcagtgatcacaatggatgatattgaaagaagttttggtggtggacctattcga
ggatattattcaggccaatacacgtctagtactaatgcatatatgctcatgtacagacaa
atcgatcacagaagaaataaaaatgcaatgactcaagaagaatttcctccacatttaaaa
gaacttcataatttattggagagaaaagccgaagaagatagacagatgagagaaagagaa
cgagatatgtataaggttcctgttcacttggctgattttatggaatgtggtgtgcgaagc
tggcaattcgattgtagtgggaccactactgttgagcaattaaaggctatggctattgag
catttcagagtcaccaaaccgtgtcgattagtcattttcaataaacaggatcaaaaagta
atcgaaaacttggaagataagaataattatctggtatgtcacttgaaatattcattggcg
tttgtattgttacttcaaatgattgatactgaagacaatagaagtgttgtatctactcca
ggatatgtcttgatgaaattgttcatgataaacttggatgataatgaagaagatattgat
gtaagtcaaccagtggaaattgaaattgaactaaacaaagagataagagacctcagtaat
ctgttatatacaaaatatgatatatctagagaatcagtattgcattttgccattcagagt
agttcaaaaccaacattgcttgaagaaagcgcaccgtgttcatctatctacaccaattat
gtttttgtgttcatagaacgtcatgctattgaacaatcagtcttggggcacaagatgaaa
aacataatcacacggtacgacaatacaattctattacaattcatcatgccaacaaaagat
acagaaactttacataaattaatggctttatacaataaaaactatatgaatggttataat
gacgatgtgtctatgttaccattagaaaaacaagcaggtgtgttagaagtggattgtgac
cagtcaaatgaagacaataatttggttgccaatcctgaggacatgtgtgttgtagctatt
ggtagtggaaatggagatcaaagtgaggatagtagtataacagatagtgaaagaacaatc
aaaggagatgccattgaagattatcatatggattctcctacttttgaacatgacccaata
aaggtttatgatcaaggcagatcggaggagaattgggatgggactgaagatgatgatgat
gataatgaatttcagtcaaatgaaaaatattttttcaaaacaacaaagttatcagacaag
acatctgaagacaatgatgaaaaactctatgcgtatgtcgataagcgcatgactgtcaaa
gaactcaaaactcaattagtgccatacatcaacataccatctgattttattattctgaat
cgatgcaaatcagacacagaattagaagaactggcgttacccagcagttctttagaagat
ttggcttactcagacacgattaaaattaccatgggtcaagcattacatgatggcgaatat
cgcggtattatttattggatagaaccacaagaacagacacagattttgtttaagaaaatg
tttgattggatcattaagaaaggtacctcagtcttagaaaccaaaagagaattattggtt
aaattaaataatacttacaatattgatatacctttaaacaggtgtcgtttgcgtaagaaa
aaaagagactctctaatgcgttgttatttcaatgaagaaatctggaatgaagatatcggt
caggggtgggaaatggtcatattggatctaaaagatcgttccgaattagaattaaataaa
accaaacgacttatgtttgtcaatcacatagaagaaacaacaccgcgtgttatttctgaa
atggaatttgttgttgatatagcatccacaacgtctccaaacacacagctgggcactgaa
atttcaaaaaaacttaatatacctgaagatcagttagaaatgggttatatgcatggtcat
tcaactgaaatcacttggaaaacaagcgtgttcaattggtcatttagtttatctgacgac
aacataattttatactgtcgtaatgcagaaaatacatccaataaagaaacaccaagcaag
tggcgtagacaacgcaaagaacgttcattaagaatacatactatgaataatgattaa
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