Rhopalosiphum maidis (corn leaf aphid): 113554043
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Entry
113554043 CDS
T06065
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113554043
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113554043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Plexin_cytopl
DDHD
eIF-3_zeta
Pal1
Presenilin
DUF4746
NatA_aux_su
DUF3292
NPR3
Motif
Other DBs
NCBI-GeneID:
113554043
NCBI-ProteinID:
XP_026813503
LinkDB
All DBs
Position
2:complement(51317040..51354642)
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AA seq
529 aa
AA seq
DB search
MVQGGIDPYASLAAASGAFPMQQPGQMAAMTLKMANPQQPTLMPATVAAPQNTAPLPPQV
TVESDPPLPPIAYSPPTGLNMSMASSQQQQQQHQQHQQHQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQSVGLIKSDQQQITVTTASQPLECTNATNALTTPVSVSVASPTN
ITNVGAGSPCSSSEDKNIQSKRLHVSNIPFRFREPDLRAMFGQFGPILDVEIIFNERGSK
GFGFVTFGNSADADEAREHLHGTVVEGRKIEVNNATARVQTKKVAAPLQLPNVLLSRNGV
LPNLAAAAALRGAAIQRGRAVAAANAVRNAAAMAAVAAASNGGFPSVGAPGFNTARLPAT
SIAVTPNPLQAINTAPGSYAPKMCFSGVYYDPFLAAQAADNNYRLQAGAVNEVAAAAAAA
SPLLKAAAAAQGTPALSSAAAVAQAQQASYVAAATYTAAAARAYNAAAAAANNQMANPAA
AAAATYTALPAGYTGREYTAESYLASHGIGPVTGYGPMYRSGYNRFTPY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaggaggaattgatccatatgcatcactcgcggcagcgtctggtgcattccct
atgcaacaacccggacaaatggctgcgatgacgcttaaaatggccaatccccagcaacca
actctaatgccagccacggtggctgcacctcaaaatacagctccacttccaccacaggtg
actgtagaaagtgatccaccgttgccacctattgcatactcacccccgactgggcttaat
atgtccatggcgtcatcacaacaacagcagcagcagcatcaacagcatcagcaacatcag
cagcagcagcaacaacaacaacagcagcagcaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacagcagcaacaacaacaacaacaacagcagcaatctgttgga
ttaatcaagtctgaccaacaacaaatcacagtcactacagcatcacaaccgttggaatgt
actaatgctacaaatgcgttgactacaccggtgtcagtatctgtagcctcaccaacgaac
attaccaatgttggcgctgggtccccttgttcatctagcgaagacaaaaatatccaatca
aagagacttcatgtatcaaatataccctttagatttagagagcctgacttgcgtgccatg
tttgggcaatttggaccaattcttgatgttgaaataatatttaatgagcgtggatcaaag
ggattcggttttgtaacgtttgggaatagcgctgacgctgatgaggctcgcgaacatctt
cacggaacagttgttgaaggcagaaaaatagaggtgaacaatgcaacagcaagagtgcaa
actaaaaaagtagctgcgcctttgcaattaccaaatgtattactctctagaaacggagta
ttgccgaaccttgccgctgcagcagcactcagaggggcagctatacaacgtggccgggct
gtggcggccgcgaacgccgtcaggaacgcggccgcaatggctgctgtggccgcggcgtcc
aacggcggatttccgtcggtcggtgctccaggattcaacaccgctagactgccagcgacc
agcattgccgtcacgcccaatccgttacaagctataaacacggctcccggttcttacgcc
cctaaaatgtgtttcagtggagtgtactatgatccattcctggcagctcaagctgcagac
aataactacaggttacaggcaggagcagtcaatgaggtagctgccgcagcagcagccgcg
tcacccctacttaaggccgcagccgcagcccaggggactccagcgttgtcgtccgccgca
gcggtggcccaagcgcaacaggcatcctacgttgccgccgccacgtacacagccgcagcg
gctagagcgtataacgcggcggctgcagccgccaacaaccagatggccaacccggcggcc
gccgccgctgctacgtacacggcgttgccagctggatatactgggcgtgaatacaccgca
gaatcatacttagctagtcacggtattggtccagtcactggatacgggccaatgtaccga
agtggctacaaccgattcaccccgtactga
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