Rhopalosiphum maidis (corn leaf aphid): 113554944
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Entry
113554944 CDS
T06065
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein Dscam2 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rmd04515
]
113554944
Cell adhesion molecules [BR:
rmd04515
]
Immunoglobulin superfamily
DSCAM family
113554944
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Dscam_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_4
Ig_6
DUF4998
Calycin_like
Motif
Other DBs
NCBI-GeneID:
113554944
NCBI-ProteinID:
XP_026814847
LinkDB
All DBs
Position
2:complement(68344649..68407126)
Genome browser
AA seq
1987 aa
AA seq
DB search
MGSCGKLLLALIFTFATKVLCEDDTTMGPMFIKEPENRVDFSNTTGAIVECTARGSPRPE
IIWIRADGTAVGDVPGLRQVKGDGNLVFPPFRAEDYKQEVHAQVYICMAKNRVGVIHSRD
VNVRAVIEEPYRSEVNNEYVIRGNSVVLKCSIPPFIADFVTIVSWQDNRGNVYEPSLIEE
NPVNLLNNDDGKYLVLPSGELHIRDVTPEDGTKSYQCRTKHRLTGETRLSATKGRLVITD
PQTSISPKIKKEELAILIGKPFMIESHVSMVCSAQGFPVPYFRWYKFIEGSNKKQAVTLD
DRIKQVSGTLIIREAKVDDSGKYLCVVNNSVGGESVETVLTVTAPLNAIVEPTIQTVDFG
RPATLTCNYEGNPVKTISWLKDGKRLSSHDGRVLRIDSVRKEDKGMYQCFVRNEQESAQG
SAELKLGGRFEPPHIKEYFNDNTMQPGVSLHLKCIASGNPTPEINWELDSKRLSSTERLR
IGQLITMTGEVVSYLNISSVHTNDGGHYRCVAVSKVGTAEHTAHLNVYGLPFIRPMDKKN
IVSGENLFVTCPVAGYPLESITWERDNRQLPINRKQKVFPNGTLIIENVERSSDQATYTC
VARNAQGHTAKGNLEVQVMVPPSIMPFSVDGELSVGDNAQLTCHVARGDMPINISWTFQS
ADGGTVGSLPEPILLNRIGKKIVMLEIPSVTEYHRGSYTCIATNRAGVIEHTAELKVNVP
PRWILEPTDKAFAQGGDAKIECKADGFPKPQVTWKKAIGNSPGDYKDIKDLKPGSDDIKV
DEGTLSIHNIQKNHEGHYLCEAVNGIGSGLSAVITISVQAPPHFEIKARNQTSEKGQPAV
LECMAKGEKPIGIVWNMNNKRLDAKEEERYTIREEILTDGVKSDLSIKRSERIDTAVFTC
VATNSFGSDDSSVQLIVQEVPEIPFGLKVLDKSGRTVQLSWLAPYDGNSPITRYIVEYKL
LKNTWETDIEKVEATGDKTEMSVVSLHPATTYHFRIVAENGVGVSKPSDPVTIITSEEAP
GGKPTNIHVDPIDENTLKVMWKAPERSDWNGEIQGYYVGYKQSSLVENKFVFETVEFSKE
EGKEHYLEIFNLKTYTQYTIVVQAFNKLGAGPMSDEIKQYTSEGVPEQPPHDTTCTTLTS
QTIRISWVSPPLSTANGVIKGYKVIYGPSDSWFNESTKDTKITVSSETILHGLKKFTNYS
MEVLAFTAGGDGVRAPRIYCQTEQDVPEAPAALKALVMSTESVLVSWKPPAEPNGDVNQY
TVYIKPSGDNKDKEPLAHKVAPNQMSFEASGLIKQDPYEFWVTASTNIGEGQPTKSIVIA
PSTRVPAMIASFDDSFVATYREDVKLPCLTVGVPAPEISWKVKGAPLESNDRIRQLPEGS
LLIRSVTRTDAGEYSCFVENSFGKDKITHRIVVLAPPHKPEVSVGATTSNTITLNLKPHA
ADKEPIHGYTIKYKPEFGDWQTAQVAAKADKFTLENLWCGSRYQIAVTAYNLIGTGDESD
LLNTKTTGSKPKIPEASKFIEVSATSVTLHLNAWLDGGCPMLYFVVEHKKKLQSEWTQVS
NNVRPGGNFVVLDLDPASWYHLRVTAHNNAGFSVAEYEFASLTLSGGTIAPPAQDVTSIY
TYLPWIPKWIDLNVVVPTAATIIVIIVGIIVVCFAWSRRVHENGQTRLRDDMTVYNQSMI
MGGNTLDKRHADFNDELGYIAPPNRKLPPVPGSNYNTCDRIKRGFPGPYHGHGTWNPRAR
HMYEELNGSNPRCRGHLPPCPGSDETMYTRCRGIDGEDICPYATFHLLGFREEMDPSKMP
FQTFPHPNGHCGTIGPGGTIASNGLMHQCPGTQTMPRNGRYSRVGGANSMFSPEYDDPAN
MGDEYGSQYGQYGAPYEQYESRASMAGRSIGSPEPPPPPPRNHDPNVSSTSNEANDSKDS
NQISEAECDQHQQPATQNYGAHLKGNTKDGMTTEELRKLIERKPNEAPAGQQRLQSGGLT
TYDTVAV
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggggtcttgcggaaagcttctgctggcccttatctttacgtttgccacaaaggtcttg
tgtgaagatgatactaccatgggacccatgtttatcaaagaaccagaaaatcgggtggat
ttttcaaatactactggagctattgttgaatgtactgctaggggtagtcctagacctgaa
attatttggatacgtgctgatggtactgctgttggagacgtacctggtttacgacaagtc
aaaggagatggcaatttggtatttccaccttttcgagcagaagattataagcaagaggta
catgcccaagtttatatttgtatggctaaaaatcgtgttggtgtgatacattctagggat
gtaaatgttcgagctgttatagaagaaccatacagaagtgaagtgaacaatgaatatgta
atacggggtaactcggttgtattaaaatgtagcataccaccatttatcgcagattttgtg
actattgtatcttggcaggataatcgtggcaatgtatacgaaccatcattaatcgaagaa
aaccctgtaaacttattaaataatgatgatggtaaatatttggttttaccttctggagaa
ttacatattcgtgacgtaacaccagaagatggaactaagtcttaccaatgccgaactaaa
catagattaactggagaaacaagacttagtgctactaaaggaagattagttattacagat
ccccaaacaagtatttcaccaaaaattaaaaaagaagaacttgccattttaattggaaaa
ccatttatgattgaatctcatgtatcaatggtttgttcagctcagggattccctgtccct
tattttcggtggtacaagtttattgaaggatccaacaaaaaacaagcagtgacattagat
gatagaattaaacaagtttctggaacattgataatacgtgaagctaaagtagatgattct
ggcaaatatttgtgtgttgtaaataactctgttggtggtgaaagtgtggaaaccgtattg
acagttacagctccattaaatgcaattgttgaacctaccattcaaacagtggattttgga
agacctgctactttgacttgcaattatgaaggaaatccagtaaaaaccatttcttggttg
aaggatggtaaacgcttgagttctcacgatggaagagtattaagaattgattccgtacgc
aaggaagataagggaatgtatcaatgttttgtgaggaatgagcaggagagtgctcaagga
agtgctgaacttaaattaggaggaagatttgaaccacctcatattaaagaatatttcaat
gataacaccatgcaaccaggagtctctttgcatttaaaatgtattgcatcaggaaatcca
actcctgaaattaactgggaattagattccaaacgccttagtagcacagaaagacttcgt
attggacaacttattacaatgacaggagaagtagtttcatatcttaatatctcttcagtc
cacactaatgatggtggtcactatagatgtgtagccgtatctaaagttggtactgctgaa
cacactgcacatctcaatgtttacggtcttccttttattagacccatggataagaaaaat
atagtgtcaggagaaaatctctttgttacgtgtccagttgctggatacccattagaatca
atcacatgggaaagagacaatcgacaacttcctatcaaccgcaagcaaaaagtatttcct
aatggtactttaatcattgaaaatgttgaaaggtcttcagatcaagctacttatacatgt
gttgctcgaaatgctcaagggcatactgctaaaggaaatttagaagtacaagtgatggta
cccccttcaataatgcctttttctgttgatggcgagttaagtgttggcgataatgctcag
ttaacatgtcatgtagcacgaggtgatatgcctattaatatctcttggacatttcaaagt
gctgatggcggaacagtgggatcattgcctgagcctatattgcttaatcgcatagggaaa
aaaattgtcatgttagaaataccatctgttactgaatatcatagaggttcttatacatgt
atagcaacaaatcgagctggtgttatcgaacacacagcagaattaaaggtcaacgttcct
cccaggtggatacttgaacctacggacaaagcctttgcgcaaggaggtgacgcaaaaatt
gaatgtaaagcggatggattccccaagccccaagtgacatggaaaaaagctattggtaat
tctccaggagattataaggatattaaggatttgaaaccaggcagtgatgacattaaagtt
gatgaaggaacattatctatccataacattcaaaaaaatcacgaaggtcactatttgtgt
gaagctgttaacggaattggttctggactgtctgcagtgatcactatcagtgtacaagct
ccacctcattttgagataaaagcaagaaatcaaacttctgagaagggacaacctgctgtt
ttggaatgtatggcaaaaggagagaaacctattggaattgtatggaatatgaataacaaa
cggctagatgctaaggaagaagaaagatatacaatacgtgaagaaatattaactgatgga
gtaaaatcagacttgagcattaagagatctgaacgaattgatactgctgtttttacatgt
gttgctactaattcatttggaagtgatgattcaagtgttcaacttattgttcaagaggtg
cctgaaattccttttggattaaaagtattggataaatctggccgaactgttcaattgtct
tggttagccccatatgatggaaattcacctatcactcgttatattgttgaatataaattg
ttgaaaaacacttgggaaacagacattgaaaaagttgaagctacaggagataaaactgaa
atgagtgtagtaagtcttcatccagctactacataccactttagaatagttgcagaaaat
ggagtaggtgtttctaaaccttctgatccagtgaccataattacatcagaagaagcacct
ggtggaaaaccaactaacattcatgttgatcctattgatgaaaatactctaaaggtaatg
tggaaagctccagaacgtagtgattggaatggtgaaattcaaggatattatgttggatat
aaacaatcgtcattggttgaaaacaaatttgtgtttgaaactgttgaattcagtaaagaa
gaaggaaaagaacattatttggaaatattcaatctcaaaacatatactcaatatacaata
gtagtacaagcttttaacaaattaggcgctggaccaatgtctgatgagattaaacaatac
acttctgaaggggtaccagaacaaccaccacatgatacaacttgtacaactttaacttct
caaactattagaatttcttgggtatcaccaccactaagtacagctaatggagttattaaa
ggttacaaagtaatttatggacctagcgattcttggtttaatgaaagtacaaaagacaca
aaaattacagtatcaagtgaaactattttacatggtcttaagaagtttacaaattacagt
atggaagtattagcgttcactgcaggtggagatggtgttcgtgctcctagaatatattgc
caaactgaacaagatgtcccagaagccccagctgctctcaaagccttggttatgtccaca
gaatcagtcttagttagttggaaacctcctgctgagcctaatggagatgtcaatcaatac
actgtttacattaaaccaagtggtgataataaagataaagaaccgttagcacataaagtt
gctccaaatcaaatgagttttgaagcatctggtcttattaagcaagatccttatgaattt
tgggtcacagcatcgactaatattggtgaaggacagcctaccaaatcaattgttattgct
cctagtactcgagttcctgctatgatcgcatcttttgatgattcatttgttgctacttac
cgcgaagatgtaaaacttccatgtttaactgttggtgtacctgccccagaaatttcatgg
aaagtcaaaggtgcaccccttgagagcaatgatcgtattcgtcagttacccgaaggttcc
ctattaattagatctgtcactagaactgatgctggagaatattcctgctttgtggaaaat
tcatttggaaaagataaaatcacacatcgtattgttgtcttagcaccacctcacaaacca
gaagtatcagttggagcaacaacatccaatacaataacattaaatttaaaacctcatgct
gctgataaagaacctattcatgggtatacaataaaatataaacctgaatttggcgattgg
caaaccgctcaagtagctgcaaaagctgataaatttacattagaaaatttatggtgtggc
tcacggtatcaaatagctgttactgcatataacttaattggcacaggtgatgaatcagat
ttattgaatacaaaaaccaccggttcaaaacctaaaattccagaagcaagtaaatttatt
gaagtatcagcaacaagtgtaacattacatttaaatgcttggttggatggtggttgtcct
atgctatactttgtagtggaacataaaaaaaaattgcaatctgaatggactcaagtttca
aataatgttagacctggaggaaattttgttgtacttgatctagatccggcctcatggtat
catttaagagtaactgctcataataatgctggattttctgttgctgaatatgaatttgca
tcattgacattaagtggaggtactattgctccccctgcacaagatgtcacatcaatttat
acatacttgccatggataccaaaatggattgatttaaatgtagtggtgccgactgctgca
acaattatagtcattattgttggtataattgtagtttgttttgcttggtctcgtagagtt
catgaaaatggacaaactagattaagagacgatatgactgtgtataatcaatcaatgatt
atgggaggcaatacacttgacaagagacacgcagatttcaatgatgaacttggttacata
gcacctcctaatcgtaaacttccacctgttcctggttccaattacaatacatgtgacagg
attaaaagaggttttcccggcccttaccacggtcacggtacatggaaccctagagcacgt
catatgtatgaagaactaaatggtagtaatcctaggtgtagggggcatttgcccccatgt
ccagggtccgacgagacaatgtacacaaggtgtagaggaatagatggtgaagacatctgt
ccatatgctacattccacttacttggttttcgtgaagaaatggatccttcaaaaatgcca
ttccaaacattcccacatcctaatggacattgtggtacaattggtcctggtggcactata
gctagtaatggtctcatgcatcaatgcccaggaacccagactatgcctcgaaatggacgt
tattctcgtgtaggtggggctaattccatgttttcacctgagtatgatgatcctgccaat
atgggagatgaatatggcagtcagtatggacaatatggagctccttatgaacagtatgaa
agtcgtgcttcaatggctggacgtagtattggaagcccagaaccacctccacctcctcct
cgtaatcatgatccaaatgtgagcagcacaagtaatgaagctaatgattccaaagacagc
aatcaaatttctgaagcagaatgtgatcaacatcaacaaccagctactcagaactatggt
gcgcatttaaaaggcaataccaaggatggtatgaccacagaagaacttcgaaaactcata
gaaaggaaaccaaacgaagccccagcaggacaacaacgcctccaaagcggagggctcaca
acctacgatactgtggcagtgtaa
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integrated database retrieval system
