Rhodothermus marinus SG0.5JP17-172: Rhom172_0050
Help
Entry
Rhom172_0050 CDS
T01606
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
rmg
Rhodothermus marinus SG0.5JP17-172
Pathway
rmg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rmg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rhom172_0050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmg03021
]
Rhom172_0050
Transcription machinery [BR:
rmg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rhom172_0050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_38
DUF6362
HTH_29
HTH_24
HTH_Crp_2
HTH_10
LexA_DNA_bind
Xre-like-HTH
HTH_28
HTH_40
HTH_3
HTH_Tnp_ISL3
Terminase_5
CMAS
TnsD
Motif
Other DBs
NCBI-ProteinID:
AEN72002
LinkDB
All DBs
Position
49248..49802
Genome browser
AA seq
184 aa
AA seq
DB search
MTDDLQTLCRRLVDSDRAALEELFRRMREPLLRYVCAIVADPTVAHDLVQDVFLDLWLRR
ATLDPGQSLRPYLYRMARNRALRHLRDERRRARKRAEHLPEAPPVEPLSPDDHVASHQLE
ALLARWLDELPERQREVLVLSRWHGLSHREIARVMGISPRTVNNHMLRALETLRRRLQAL
ALMP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacgacctgcaaacgctctgccggcggttggttgattcggaccgtgcggcgctg
gaggagctgtttcgccgcatgcgcgagccgctcctgcgctacgtctgtgccatcgtggcg
gatcctaccgtggcgcacgacctggtgcaggacgtgtttctggacctgtggctgcggcgg
gccacgctcgatccggggcaatcactgcggccctatctctatcgcatggcccgcaaccgg
gcgttgcgccacctgcgcgacgagcgccgccgggcccgtaagcgcgccgaacacctgccg
gaggccccgccggtcgagccgctgtcgccggacgatcacgtggcgtcgcaccagctcgaa
gccctgctggcgcgctggctcgatgaactccccgagcgccagcgcgaggtgctggtgctc
agccgctggcacggactgagtcatcgcgagatcgcccgggtgatgggtatctccccacga
accgtcaacaaccacatgttgcgggcgctggagacgctgcgccggcggcttcaggcgctc
gccctcatgccatga
DBGET
integrated database retrieval system
