Ralstonia mannitolilytica: TK49_02980
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Entry
TK49_02980 CDS
T03778
Name
(GenBank) hemagglutinin
Organism
rmn
Ralstonia mannitolilytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
TIG
Cadherin_5
NtrZ
SprB
TIG_SUH
Motif
Other DBs
NCBI-ProteinID:
AJW43770
LinkDB
All DBs
Position
1:609377..614410
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AA seq
1677 aa
AA seq
DB search
MRVLTQSSPYGRRGVAGWSMFRCLEAQGREWLRRGLLAVLAIWMTVLSQAALAAPCTVTF
ATNMNVQKSYVFTGADTSNCDPFLAGIAYDSVGDANSSSGPVFVFNTATAQGGTVAIYNG
SVPPSGDPNTNGFVYTPPNGFSGTDTATFYTSNDGVTWLPNGIVSITVISTAPTVTSVSP
SSGPTAGGTSVTITGTNFAGTTAVKFGATNASSFTVNSATSITATAPAGAAGTVDVTVTN
ASGTSPTSAFDRYTFVAPPVANAVSTTVAHGSTSNPVTLNITGGAPTSVAVATQAAHGTA
TASGTSITYTPNASYSGTDSFTYTATNVGGTSAPATVTVTVSNPTVTYAPSSPAAGTVGT
AYSQALASASGGTGPYTYTIASGALPAGISLASNGTLSGTPTAGGTFNFTVTATDSSTGA
GPFTATSGTLTLTVAAPTITLSPSALTNATAATAYSQTITASGGTAAYTYAIASGALPAG
LTFSSGGVLSGTPTAGGTFNFTVTTTDSSTGSGPYTGSRAYTLVVNAPTLAVTPASGGLS
ASAGVAYSQAFTVSGGVAPYTYSLVVNSGTMPTGLSFNTGTGVLSGTPITTGSVNFTVTA
TDHATGTGPYSTSGTYTLTTTAPTITVSPATLTAATVGVAYSQTATAGGGAAPYSYALTA
GALPAGLTLNGSTGAITGTPTAGGSSNFTVTATDANSYTGSRAYTLTVNAATVSVSPNTL
PGGTIATAYSQTLLASGGTGPYTYAVAAGSLPTGLTLSSNGTLSGTPTAGGTFNFTVTAT
DSSTGTGPYTGSRAYSLTIGSPTLVITPASGSLSGVAGMAYSRNFTASGGTNPYTYGFVV
NSGTVPTGLTWNGATGTLAGTPTTAGTVSFTVTATDSSTGAGAPFAVSGVYTLTIAAPSV
TVSPVTLPNPGVATAYSQTITAANGTAPYTYAVTAGALPAGLSLNTSGVLSGTPSAGGTF
NFTITATDANSFTASRAYSVTIGAPTITVNPAVATSAQVTTAYSQTFSATGGTAPYTYAV
STGSLPAGLSLNASTGVLSGTPTTLGSSTFTVKATDSSTGVGAPYSGTRSYTITVGQAIG
TAPAITATTMSTVPITLHATANATGGPFSSIAIVSPPASGTAVVNGLDIVYTPTPTTSGA
VNFTYALINTAGTSAPIPVTVNVNAVPIAVVQKQAITSSGQGVSVDLTEGATGGPFTGAT
LVSVVPANAGTATIVQKAVQTPAGVRSPAAAASTYVLNFTPSGTYSGQAAITYTLSNAFA
TSAPATVQVNVAPRKDPSADPDVAGLINAQVQAARRFATTQIDNYNRRLEALHGSGRAPS
SNGLTVAMPGQRVDMQARCQDVVGISAHDACMRGEGQGVRPFARAKRTTDAANGNADKSN
ADAGPDLPGADAAGAGPDNTDPNLAFWSAGTLDFGFANAGSQRSGFRFTTGGVTAGADYR
VSDQLSIGAGFGYGRDSTDIGNAGTKSTGDSYSLALYGSYRPLPSLFVDGVAGFGTLSFD
SRRWVTDSNDFATGKRNGKQVFASVSAGYEHRDRTWLVSPYGRLSVSQSTLDQFTESGAG
LNALTYFDQTVTTVSGTLGLRAEYTQKTKWGTFLPFARVEYQHDFNGQSNAGLAYADLAS
AGPAYYVPGTPFGRDRMQIGLGTKFRTGPLTFGLDYSVMAGMGGLQQGIRLTFAAPF
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgctgacacaaagcagcccgtatggccggcgtggggtcgccggatggtcgatg
ttccgttgtctggaggcgcaggggcgggaatggctgcgccgaggcctgctggccgtgctg
gcgatttggatgacggtgttgtcgcaagcagcactcgctgcgccctgcaccgtcacattc
gcgaccaacatgaatgtgcagaagtcttatgtctttacgggcgcggacacgagcaactgc
gaccccttcctggctggcattgcttacgattctgtcggcgatgcaaacagttcttccggc
ccggtctttgtctttaatacggcgaccgcccaaggcggcacagtcgccatctacaacggt
tcggtaccgccgtcgggggatccgaataccaatggtttcgtatacaccccgccgaacggc
ttcagtggcaccgataccgccacgttctacaccagcaatgacggcgtcacctggctgccc
aacggtatcgtcagcatcactgtcatctccactgcgcccacggtgacgagcgtttcgccg
agctcaggcccgaccgccggcggcacctccgtcaccatcaccggcacgaatttcgccggc
accacggcggtcaagtttggcgcgaccaacgcaagcagcttcaccgtcaacagcgccacg
tcgatcacagccaccgcgcccgcaggggcggccggtacggtagacgtcaccgtgaccaac
gccagcggaaccagccccaccagcgcgtttgatcgttacacctttgtggcgcctcccgtt
gcgaatgcggtcagcaccaccgttgcgcacggcagcacaagcaaccccgtcacgctgaac
atcactggcggcgcgcccaccagcgtggccgtcgcaacgcaggcagcgcacggcacggcc
acagcgtcgggcacgtcgatcacctacacacccaacgcgtcgtactcgggcacggactcg
ttcacgtacacggcgaccaacgtgggcggcacgtcggcgccggccaccgtgacggtcacc
gtgtcgaatccgactgtcacgtatgcgccgtcgtcacctgcggcgggcacggtgggtacg
gcttatagccaggcgctggcttcggccagcggcggcacggggccttacacctatacgatt
gcctcgggggcgctgccggccggcatttcgctggccagcaacggtacgctctcgggtacg
cccacggcgggcggtacgttcaacttcaccgtgacggccaccgacagcagcacgggtgcc
ggcccattcacagcgaccagcggcacgctcacgctgacagttgccgccccgacgatcacg
ctctcgccttccgcgctgaccaatgccaccgctgcaacggcatacagccagacgataacg
gccagcggcggtacggcggcctacacctacgccatcgcttccggagcgttgccggcgggc
ctcacgttcagttcgggcggggtgctgtcggggacgcccacggcaggcggcacgttcaac
ttcaccgtgaccaccaccgacagcagtaccggcagcggcccctatacaggcagccgtgcc
tatacgctcgtcgtcaacgcgcccacgttggcagtcacaccggcatcgggcggtctcagc
gcctcagccggcgtggcgtacagccaggccttcacggtgagtggcggcgtggccccgtac
acctacagccttgtcgtcaacagcggcacgatgccgaccggcctctcgttcaataccggt
accggcgtgttgtccggtacgcccattaccacgggctcggtcaacttcacggtcaccgcg
accgatcacgcaacgggcacggggccgtacagcacgtctggcacctatacgctgaccacc
acggcgcccaccattaccgtgtcgcccgccacgctgactgcggcgacggtgggcgtcgcc
tacagccagactgccacggccggcgggggtgccgcgccttatagctacgcgctgacggcc
ggcgcgctgccggctggcctgaccttgaacggcagcaccggcgcaatcaccggtacgccc
acggccggcggcagctccaacttcacggtcacagccaccgatgccaacagctataccggc
tcgcgcgcgtacaccttgacggtcaacgcagccaccgtctcggttagcccgaacacgctg
ccgggcggcaccatcgccacggcatacagccagaccctcttggcaagcggcggcacaggt
ccttacacgtacgccgtcgcggcaggctcgctgccgaccgggctgacgctgtccagcaac
ggcacgctgtcgggtacgcccacggccggcggcacgttcaacttcaccgtcaccgcgact
gacagcagtaccggaaccggcccctacacgggtagccgcgcctactcgctgacgattggg
tcgcccaccttggtcatcacgccggcctcgggttctctcagcggtgtggccggcatggct
tacagccgcaacttcaccgcaagcggtggtacgaatccgtacacctatggctttgtggtc
aacagcggcaccgtgcccacgggcctgacgtggaacggcgctaccggcacgctggccggt
accccaaccacggccggcacggtcagctttaccgtcaccgctaccgacagttcgacaggg
gcgggcgctccgtttgcggtcagcggtgtctatacgctcaccatcgctgcgcccagcgtg
acggtatcgcccgtcacgctgcccaacccgggcgttgcaaccgcgtacagccagaccata
acggcggccaacggcaccgcgccgtacacctatgccgtgacggcgggcgcattgccggct
ggcttgagcctgaacacctccggcgtgctgtcgggcacgccctccgcaggaggcacgttc
aacttcacgatcacggctaccgacgccaacagctttaccgccagccgtgcctacagcgtc
accatcggcgcgcccacgatcacggtcaatccggcggtcgcaacgtcggcccaggtcacc
acggcctacagccagaccttcagcgccaccggcggcaccgccccttacacctacgccgta
tccacagggtcgttgcccgcgggcctcagcctgaatgccagcacaggcgttctgtccggc
acgcccaccacgctgggcagcagcacgttcactgtgaaggccaccgacagcagcaccgga
gtgggtgccccgtacagcgggacacgcagctacacgatcacagtcggtcaggcgatcggc
accgcgccggcaatcacggccaccaccatgtcaacggtgccgatcacgctgcatgcaacg
gccaatgcaacgggcggtccgttctcgtccatcgcgattgtcagtccgcctgccagcggc
accgccgtcgtcaacgggctggacatcgtctacacgccgaccccgaccacctctggcgcc
gtcaacttcacctatgcgctgatcaacacggcgggcacatcggcgccgattccggtgacg
gtcaacgtgaacgcggtgccgattgccgtggtgcagaagcaagccatcacgtcgtcgggt
cagggggtgagcgtggacttgaccgaaggcgccacgggtggccccttcacgggggcgacg
ctggtgtcggtggtgccagccaacgccggtacggccacgatcgtgcagaaggccgtgcag
acgccggcaggcgtgaggagcccggctgcggcggcatcgacctacgtgctgaacttcact
ccgtcgggcacctacagcggtcaagctgccatcacctacacgctgtccaacgcgtttgcc
acttcggcgccggcaaccgtgcaggtgaacgttgctccgcgcaaggacccctcggccgac
cccgacgtggcaggcctgatcaacgcgcaagtccaggccgcgcgccgctttgccaccacg
cagatcgacaactacaaccgtcgcctggaagcgctgcatggcagcggccgggcaccgtca
agcaacggtctgacggtggccatgccgggccagcgcgttgacatgcaggcgcgttgccag
gatgtggtcggcatttctgcgcacgatgcgtgcatgcgcggtgagggccagggcgtgcgc
ccgttcgcacgggccaagcgcaccaccgatgcggccaacggcaacgccgacaagtcgaac
gcagatgccggccctgacctgcccggtgccgacgcggcgggcgcgggcccggacaacacc
gacccgaacctcgccttctggagtgccggtacgctggacttcggtttcgccaacgctggc
tcgcaacgctccggtttccgcttcaccacgggcggcgtgacagccggcgcggattaccgc
gtgtccgatcagctctcgatcggtgctggtttcggctacgggcgcgattccaccgacatc
ggcaacgcgggcaccaagagcacgggcgacagctatagcctcgcgctctacggcagctat
cgcccgctgccttcgttgttcgtcgatggtgtggccggcttcggcacgctcagcttcgac
tcgcgccgttgggtgacggactccaacgacttcgccaccggcaaacgcaacggcaagcag
gtgttcgcctccgtgtcggccggctacgagcatcgcgatcgcacctggctggtctcgcct
tacggccgtttgtcggtctcgcaatcgacgctggatcagttcactgaatcgggcgccggc
ctcaacgcgctgacgtacttcgaccagacggtgacgacggtatccggcacgctcggcctg
cgcgcggaatacacgcagaagaccaagtggggcaccttcttgccgtttgcgcgcgtggag
taccagcacgacttcaacggtcagagcaacgcagggttggcgtatgccgatctggcatcg
gcgggccctgcctattacgtgccgggcacgccgtttgggcgcgatcgcatgcagatcggg
ttgggaacgaagttccgcaccgggccgctcacgtttgggctggactacagcgtgatggcc
gggatgggcggtttgcagcagggcatccggttgacgtttgctgcaccgttctga
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