Rhipicephalus microplus (southern cattle tick): 119180618
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Entry
119180618 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(I) chain-like
KO
K22649
B-cell CLL/lymphoma 9 protein
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
119180618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCL9
Motif
Other DBs
NCBI-GeneID:
119180618
NCBI-ProteinID:
XP_037287626
LinkDB
All DBs
Position
11:118150303..118311258
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AA seq
1810 aa
AA seq
DB search
MPRKFKTQDGNPSEAIRGLWEGAYVSQFVRLFQRKFGFQSLTTQELEDSLLNPKSLVVPD
ICARLLRFITRQSSILISNFEESLAELLQEKEVQFTKAPWRDLSPGDKLLTVKWLLDYAY
ESQGEELSEFLDDHFDAEDLRGIRVGQDALDNVYWYLEDLRLYRELCPKKPQRSREWDCV
CLTVSDWQGFLKQFRKSSNPREKQLHTFLSSHLFPVVQAQAQALKCEERDLETENRWLLE
REQREILLPRPGSDMKCNGAPSVDKAATEPQPAAAADECGPKAAPAKEAAPTCPAEAAGA
GNIGRPPGTPVSAADVAASGGVLVNGGASLPPVTGPSLADSGTPMSMLGDNPGDGMVAGN
KDNPGAMAVPTSSDAAAAAAGPMLPSMSTQQQHQQQHQQQQHQHQQQQQQPMGVPQHQLP
QHPHHHAGGTLTMGSGAPQHPHGGMPSHLIPPHQQHPQPHPGVGQCNPLAGSAHMAGGNM
AVGGPSPMGGPGMGGPQVLPHGGNMGTSGLHRPPSGSSMPPGGAGCPMPPQGGAGVGGGG
LEAQYMQQQSQIFVFTTGLANQAAEAVLTGQCPSIIAFHCAQPGTKRILEKHPLKIQQFS
KQNPAAWLNTLAQMKQRGAQGMPGGPMGPTPGGGAMKVPQTFGPGFCGPPHACGPTHPGG
AAWQPQESWGAGPYGPAGMAPQRGPSPASNRGPQQGHHPQGCGPPNGGCFPASGGAYPGM
GGPGCGGNPAQMNAGVKVPDENLTPQQRQHREEQLAMIRKMQKLLFPDQQVMGNATGPPG
QQQQQQQTGAPQQPQGGGVPPRPRGPDQFGHCGDHQHEGAGMPPQMQQQSQPQQQQHFGP
APTQEPCSQQKRKRKKRENVSSQPDGQNLGLLQRNIHQKPATVKREEWITSSASGNQACC
CAGPQGAMMGHPPADWQAQQQQGGMTAQKPYLEDRRRKGAAATNQPQGLFPACGSEFSAS
GSPSGYITRPGSCPNPNFNNGTTGPVASSTGNRPSSCAGFNSPGSFSNPPTPSGFPGAPG
ASPAGPSSSFPSAPGASPGMVFSPGAVAQQQQTAASSFGGRPPAQCGAGGSQFPGSAPCG
SPALQPFSPSVRGSSGSSPPNYGAGGAGGSGSPGTVPPPPRSPASGASPRLQQGPPPPYG
ARGPMAPSPHPPTSPSPRLGTASPATDPGARQFSHPVGGGRLANPSPGSVQTTPLSSPKP
CRGGPHTPTTPGGGSAVPSPSSAGSSRKRSATPLTQDQPEFVTGINTSASTGGATLGHPG
GIKGEPGLMPVPSPQQIQYLGSLESQELTIQKQANLGVPDGSLSAQGGPPHGGNPMGQNP
MGPTAATQGVMSQQQGMLQSLGHPSEIPPLDMGPSLASENXQGSYHSSCSSGMEGAAPRM
GPAMSDGTGGPRFATSPPYDTRFPGGAPHEAPGFGYMDPRCRVGVGPEPDTTDPSHQGRY
PAAHHQGFATGAMPPHQGAAFPGASQAGPTTGARDFGEPMMGAAGFPRPGGGYVGDVPHS
PHIQSLQKMTPPFDGSGKGDVPADPLNGPHRGSPGCLVPLEPASAQFMGGGGPMMSHGRG
AATAAAAPYPTMAPARNSPGPRARGRGSANSAAAAAAAAAAASFGGGANVQVKLGAPNTI
QYLPARPQNPVAAPPHRAPSLDFLQRFTTPLTNLDTKVPTQNLQYFPPSGPPQRTGPVMM
MRGGPSGPGAYAGARGLPPMDAYGGGPNGPQHGGMPVNAMFQGGKGLRPASPGGGAGGDV
VSQPLPPTVGQAFSYKQGPFYGPTTADPNYAVQFHNFQQQLYATNTRSQGATTSGPSGAT
AAAAGFFGPK
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaagttcaaaacacaagatgggaatccgtctgaagccatccggggcctctgg
gagggagcatacgtgtcacagtttgtgcgcctctttcagcgcaaatttggatttcagagc
ctaacaactcaggaattggaagactctcttctcaatcccaagagcctggttgttcctgat
atctgcgctcggctgctcaggttcatcacccggcagtcctccattttgatctctaatttt
gaagaaagccttgctgaactcttgcaagaaaaggaagttcaattcaccaaggcaccctgg
agggacctctctccaggagacaagctcctgaccgtcaagtggttgctggactatgcgtac
gagtctcagggagaagagctgtctgaattcttggacgaccacttcgacgctgaggatttg
cgtggcattcgtgtaggccaagacgctcttgacaatgtttactggtatctcgaagacctg
cgcctgtatcgtgaactgtgccccaagaagccccaacgcagccgggagtgggactgtgtc
tgcctgacagtgtcggactggcagggcttcctcaagcagttccgcaagtcctccaacccg
cgggagaaacagttgcacaccttcctctcatcgcacctcttccccgttgtccaggcacag
gcacaggcattgaagtgtgaagagcgtgacttggaaacagagaaccgttggcttctcgag
cgggagcagcgcgagattctccttcctcggccgggttccgacatgaagtgcaacggggct
ccctcagtggataaggccgccactgagcctcagcccgcagcagcggccgacgagtgcggg
cccaaggcggcaccggcgaaggaagcagcgcctacttgtccggccgaagccgccggcgca
ggaaacattggtcgccctcctggcacgccagtttctgccgcagacgttgccgcatctggc
ggagttcttgtcaacgggggtgcaagccttccacctgtgactggcccatccttggctgac
agtggaacgccaatgtccatgctgggtgataacccgggtgatggcatggtcgcaggcaat
aaggataatccgggagctatggctgtgccaacctcctccgatgctgcagcagcagcggct
ggccccatgctgccatcgatgtcaacgcagcagcaacatcagcagcagcatcagcaacag
cagcaccaacaccagcagcaacagcaacagcccatgggggtgccacagcaccaattacca
caacacccacaccaccatgcaggcggcaccctcaccatgggaagcggggcaccacagcac
cctcatggtggcatgccctcgcacctgataccacctcatcagcagcatccgcagccacat
cctggagtcgggcagtgcaacccactcgcaggttctgcacacatggctgggggaaacatg
gccgttggaggaccgagccccatggggggaccgggcatgggtggacctcaggtgttaccc
catggtggcaacatgggcacttcagggcttcacaggccgccatcggggtcatcaatgccc
cctggtggagcaggctgccccatgcctccgcagggtggtgcaggtgttggtggtggcggt
ttggaagcacagtacatgcagcagcagagccagatcttcgttttcacgacaggcctggca
aatcaggcggccgaggctgtgctgactggacaatgccccagcatcattgcattccattgt
gcacagccaggaactaagcgtatccttgagaaacaccccctcaagatccagcagtttagc
aaacagaacccggctgcctggctcaacactctagcccaaatgaagcagcgaggcgcccag
ggtatgccggggggccccatgggaccgactcccggtggtggggccatgaaggtcccccag
acatttggccccgggttctgcggccctcctcacgcgtgtggacctacccatcccggagga
gctgcctggcagcctcaggaatcttggggggccggcccctacggccccgcaggcatggcg
ccgcagcggggcccatcgccggccagcaaccgaggaccccagcagggccatcatcctcaa
ggctgcggaccacccaacggtggctgctttcccgcaagcggaggggcctaccctggcatg
ggaggacccggttgtggtggcaatccggctcagatgaatgcgggagtcaaagtgccggac
gaaaacttgacaccccagcagaggcagcatcgtgaagagcagctagcgatgatccgtaag
atgcagaagctgctcttcccagaccagcaagtcatgggcaacgctacaggcccccctggc
cagcagcagcagcagcagcagactggggctccccagcagccacaggggggtggggtgccc
ccccgccctaggggccccgaccagtttgggcactgtggggaccaccagcatgaaggtgca
ggcatgcctccgcaaatgcagcagcagtcacagccgcagcagcagcaacacttcggtcca
gctcccacgcaggagccttgttcccaacaaaaaagaaaaagaaaaaaaagagaaaatgtt
tcatctcaaccagacgggcagaacctcggattgctacaaagaaacatccaccagaagcca
gcgacagtgaagcgtgaagaatggatcacgtcttcagcctctggaaaccaggcatgctgt
tgtgcagggccccagggagccatgatgggccatccgccggctgactggcaagcccagcag
cagcaaggtggcatgacggcccaaaagccatacctcgaggatcgacgccgtaagggggct
gctgccaccaatcaaccgcaggggctcttcccagcgtgcggcagcgagttctcggcctcc
ggctcgcccagtggctacattacgcggccaggatcctgccccaacccaaacttcaataat
ggtaccacgggtcctgtggctagctctacgggcaacaggcccagttcatgtgccggcttt
aattctcctggttccttctcaaatccaccgacgccttcggggttccctggtgcgccggga
gccagtccagctggcccatcatctagttttccttctgcgcccggtgccagccccggcatg
gtgttcagtcccggtgcagtagcccagcagcagcagacagctgcaagctccttcggcggt
cggcctcctgctcagtgtggcgcaggcggaagtcagttcccgggatccgcaccctgcggc
agtccagcactccagccattctcgccgtcagttcgtgggtcctcggggtccagcccacca
aactacggggcaggcggggcaggcggcagtgggagtccaggcaccgtcccgccaccaccg
aggagtcccgcatctggcgcaagtccacgtctccaacaggggccaccgccaccgtacggt
gcgaggggtcccatggcacccagtccccacccaccgacgtcgccgtcccctcgtcttggc
acagcatctccagcgaccgaccctggtgcccggcaattctcacatcctgttggtggtggt
cggttggccaaccccagccccggcagtgtgcagacgacaccattgagctcgcccaagccc
tgtcgtgggggacctcacacacctaccacacccggcgggggcagtgccgtgcccagcccg
tcgtcggcaggaagctcacggaagcggtcagccactccactcacgcaagatcagccagag
tttgtcactggcatcaatacatctgcatcaacgggtggggctacgctaggtcatcctggt
ggtatcaaaggcgagcccggcctgatgccagttccctcgccacagcagatccagtacctg
ggttccttggagagccaggagcttactatccagaagcaggccaacctgggggtgcccgac
ggctccctaagcgcgcaggggggaccccctcatggggggaaccccatgggccagaacccc
atggggccaacggcagcgacacagggggtgatgtcccagcaacagggcatgctgcaaagc
ctcggacacccatcagaaatcccgcctctggacatgggccccagtctggcctctgagaat
ntccagggatcttaccactcttcgtgctcctctggcatggaaggtgccgctccccgcatg
ggcccggccatgtcggatggtacagggggtccgcgctttgcaacgagtcccccttatgac
acgcgattcccaggaggagcaccgcacgaagcacccggctttggctacatggacccccgg
tgcagggttggtgtagggcccgagccagacacgacggacccgtcgcaccagggccgctac
cctgcagcacaccaccagggctttgctacgggtgccatgccgccgcatcagggggctgca
tttcctggggcttcccaggcggggccaacaacgggggcacgcgattttggcgagccgatg
atgggcgctgcgggcttcccaaggcccggcggcggctatgtcggtgatgttccccactcg
ccccacatccagagcctgcagaagatgacgcccccttttgatggcagcggcaaaggagat
gtgccagcagacccacttaacggaccccatcgtggaagtcctggctgcttggtgcctctc
gaaccagcttcggcacagtttatgggcggcggtggacccatgatgtctcacggaagggga
gctgccacggctgctgcagcaccgtatcctacgatggcccctgcccgcaactcacctgga
cctcgtgcacggggtcgtggctctgcgaactctgctgcagctgctgctgcagcagcagcg
gctgcttccttcggaggtggagccaatgtgcaagtgaaacttggtgcccccaacacgatc
cagtacctccccgcacgacctcagaacccagtggcagcaccgccgcaccgagcaccgagc
ttggatttcctccagcgtttcacaacgccgctaaccaacctcgacacaaaggtgcccacg
cagaacctacagtacttcccaccatcaggaccaccccagaggacgggtcccgtcatgatg
atgcgaggtgggcccagtggacctggggcctatgcaggagcacgcgggttacccccaatg
gacgcatatggcgggggccccaatggtcctcagcatggagggatgcctgtcaatgctatg
tttcagggcggcaagggactgcggccggcatctcccggaggtggcgccggtggtgacgta
gtgtcgcagccgctgcctccgactgtggggcaggcattcagttacaagcagggccccttc
tatggacccacaacagccgaccccaactatgcggtgcagtttcacaactttcagcagcag
ctctacgccactaacacccgcagccagggtgcaacaacgtctggaccgtcgggcgcgaca
gcggctgccgcggggttctttggcccaaagtga
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