Rhipicephalus microplus (southern cattle tick): 119181378
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Entry
119181378 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119181378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119181378
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119181378
Spliceosome [BR:
rmp03041
]
Complex A
U2 snRNP components
U2 related factors
119181378
Complex B
119181378
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
119181378
NCBI-ProteinID:
XP_037288500
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All DBs
Position
11:65781427..65785336
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AA seq
1081 aa
AA seq
DB search
MARDKKRRRSLSRSSSSSPERMSSRRRRNRSRSRDRRRRSIERHRRSRSRDRRRSPRDRY
RRSRSRGRRTFSRSRSRSPSRDLRSKSQDRKRSRSHDRDDKKGEQSALAALAAATAAAAA
VTGALAAAENTTLDKNAQQQQLDLEMQKRRERIEKWRQARKKTEQTAAAALVLPLPGKKW
SLEDDEEDDSGPPPPPLNDDPDDGPGPPSLKKKLDPDEADGDTTTEEVKKEDEVKQEEEE
DDGIDPLDAYMMGIQNEVKQLKDKALKTDVGAAAPEKANNVVTMIVGVAKKKEDKKKGEL
MEQNVDALEYSSEEETEDLQTTMNNLQAGKAKKPVSVSIEDISYAPFRKNFYIEVPELAK
MTPGEVETLRAELEGIKVRGKGCPKPIRNWAQCGVSKKVLELLKKHGFEKPTPIQAQAIP
AVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQQPLEDDDGPIAVIMTPTRELAMQITKD
CKKFTKSLGLRVVCVYGGTGISEQIADLKRGAEIIVCTPGRMIDMLAANNGRVTNFRRTT
YVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATFPRQMEALARRILIKPIEILVG
GRSVVCKDVEQHVVILTQEEKFFKLLELLGLYQDKGSAIVFVDKQEHADILLKDLMKASH
NAMALHGGIDQFDRDSTIVDFKAGKVGVLIATSVAARGLDVKHLILVVNFDCPNHYEDYV
HRCGRTGRAGNKGYAYTFITEDQGRYTADVIKALELSGNPIPEDLQKLFDEYKARQEAEG
KKVRGGSGFSGKGFKFDEAESHLKTEKKKFQRAALGIQDSDDEDAEGDIDREIETMLAPK
KRIKELLPGPSVTGQATPAPGVPGTVAGVAVPLGTAATTAAPSGTVSEKLEMARMLACRI
NMGRTFSAPSTPAPEVVMSAQSATEAMMRGQYVPELPSPVISAKTLAEQRAEKLHARLNY
QPKVVEEEPPEPPPPKEKFQKYEEELEINDFPQQARWKVTSKEAMAQISEYSEAGITVRG
TYYPSGKEPKGGDRKLYLAIESTSELAVSKARAEIIRLIKEEMVKMQHSYQPINRGRYKV
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgacaagaagaggcgccgatcgctctcgcgcagttcttccagctcgccggag
aggatgagtagcagacgacgccgaaaccgatcccgaagtcgtgaccgacgccgtcgcagc
atcgagcgtcaccgacgatcccggtcccgcgaccgccgccgatcgcccagggacaggtac
cgccgttcgcggtcgcgcggtcgccggactttctcgcggtcccgctcgcggtctccgtct
cgggacctccgctccaagagtcaagaccgcaagcgctcgcgtagccacgaccgcgacgac
aagaagggtgagcagtcagcattggcggccttggcggccgcgaccgcggcagccgctgcg
gtcaccggagccctggccgccgccgaaaacaccacgctggacaagaacgcgcagcagcag
cagctggacctggaaatgcagaagcggcgggaacgaatcgaaaagtggcgccaggcgcgc
aagaagacggaacagacggccgcagccgccctggtcctaccgttgcccggcaagaagtgg
agcctcgaggacgacgaggaagatgactcgggaccgccgccaccacccctcaatgacgac
ccggatgatggacccggcccgccgtcgctgaagaagaagctggaccctgacgaagcggac
ggcgatacgacgaccgaagaggtcaagaaagaggacgaagtcaagcaggaggaagaggag
gacgacggcatcgacccgttggacgcgtatatgatgggcatccagaacgaggtgaagcaa
ctgaaagacaaggcgctgaagaccgacgtgggcgcggccgcgcccgagaaggccaacaac
gtggtcacgatgatcgtcggcgtcgccaagaagaaagaggacaagaagaagggtgaactc
atggagcaaaacgtggacgccctggagtactcgtccgaggaggagaccgaagatctgcag
acgacaatgaacaacctgcaagccggaaaggcaaagaaaccggtgtctgtctccatagaa
gacatctcgtacgcaccattccgcaagaatttctacatcgaggtgcccgagttggcaaag
atgacccctggcgaagtggagacgctgcgtgctgaactggagggcatcaaggtgcgtggc
aaagggtgccctaagccgatccgcaactgggcgcagtgcggggtcagcaagaaagtgctg
gaactgctgaagaagcacgggtttgaaaagcctacccctattcaagcccaggccatacct
gcagtgatgtctggcagggaccttattggcattgcgaagacggggtcgggcaagacgctc
gcattccttctgcccatgttccgacacatcttggaccagcaaccgctggaagacgacgat
ggccccatagctgtaattatgacgccaactcgagagcttgccatgcagatcactaaggat
tgtaaaaaattcacaaagtcgcttggcctgcgcgttgtttgtgtgtacggtggcactggc
atttctgaacagattgcggaccttaaacgtggtgcagagatcatcgtctgcaccccaggg
cgcatgatcgatatgcttgccgctaacaacggtagggtgaccaacttccgtaggaccaca
tatgttgtgttagatgaagctgaccgcatgtttgacatgggtttcgagcctcaggttatg
cgcatcattgactctatacgtcccgatcggcagaccgtcatgttttctgccacttttcca
cggcaaatggaggctcttgccagacgtattctaatcaaacctattgaaatcttggtaggg
ggaaggagtgttgtgtgcaaagacgtggaacagcacgtcgtcattctcacccaagaggag
aagtttttcaaacttctggaacttttgggcctgtatcaggataaaggcagcgccattgtg
tttgtggacaagcaagagcacgcagacatactcttgaaagacctcatgaaggcctcgcac
aacgccatggctctccacggtggcattgaccagtttgaccgcgactccactatagtggac
ttcaaggcaggcaaagtgggtgtcctcatagctacatcagtggcagcgcgaggactggac
gtgaaacatctcatccttgttgtcaactttgactgcccaaaccactatgaagattacgta
catcgctgtggtcggacggggcgtgctgggaacaaaggctacgcctacacttttatcaca
gaagaccaggggcgttatactgccgacgtcattaaggcactggaacttagtggtaaccct
ataccagaagacctgcagaaactctttgatgagtacaaggcgagacaggaggcggaaggg
aagaaagtgcggggaggcagtggattctctggtaaaggtttcaagtttgacgaggccgaa
tcacacctcaaaaccgagaaaaagaagttccagagagctgcgctgggcattcaagactct
gacgatgaagatgctgaaggtgacatcgatcgcgagattgaaactatgctcgcacccaag
aaacgcatcaaggaactcttgcctggtccctcggtcactggacaggcaacacctgcaccg
ggtgtgcccggcactgttgccggcgttgcagtcccgcttggtacagccgctaccactgca
gctccaagtggcacagtctccgagaagctcgagatggcgcgcatgttagcgtgccgcatc
aacatggggcgcacatttagtgcaccttccacgcccgcgccggaggtcgtgatgtccgca
cagtccgccactgaagccatgatgcgcggacagtacgtgccggagctgccgtcgccagtg
atatcagccaagacgctcgccgaacagagagccgagaagctgcatgccagactcaactac
cagcccaaggtcgtcgaagaagagccccccgagccacctccaccgaaggagaagttccag
aagtacgaggaagaactcgagatcaacgacttcccccagcaggctaggtggaaggtcacg
tccaaggaagccatggcccagatcagcgaatactcggaggccggcatcacggtgcgtggc
acttactacccttcgggcaaagagccgaaaggcggagaccgcaagttgtacctggccatc
gaaagtacaagcgagcttgccgtcagcaaggcacgggcggagatcattcggctcatcaag
gaagagatggtcaagatgcagcattcgtaccaacccatcaacaggggacgctacaaggtg
ctgtga
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