Rhipicephalus microplus (southern cattle tick): 119181607
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Entry
119181607 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119181607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119181607
03009 Ribosome biogenesis [BR:
rmp03009
]
119181607
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119181607
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119181607
Complex B
119181607
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119181607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UBA_3
CH
Motif
Other DBs
NCBI-GeneID:
119181607
NCBI-ProteinID:
XP_037288753
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All DBs
Position
11:complement(61124266..61125714)
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AA seq
482 aa
AA seq
DB search
MGTWWDKLCASDMFKYMPEDETADLRQRGAEYKSCLTSDAVSYIAPTPMSLHRLRPLSIY
QDESSKWSAADVKAYRIANEITVTGRAVPKPISRLAEVDIPDHVTEGAEALDYCPLTAVQ
SQCWPIALAGRDLLAVIYGQSGENSRSYLIPAIVHVISQPTPQPVNGPCVLVLVPTRQSS
VQVHRQVTDFEKYATVHSLCLCSGDWKERQLKRLSKASFQIWIATPSRLLSFIENGKVSL
TSTCTFLVLDEVDTMLAVGFEKKLRTIASLVGPTRQTLMFTASRPTALIHIAEDLLEDYV
QVGFGQSKIVENVEHFVVFCEKTEKMKRLVALLDDVVNEKDDKVIVFAGNKRSVEEIVSE
LRLRGRLAMSIHGTKSRLEREWALDGLRSGVASVLVMTDVMTQRVVDVGAVHCIVNYENP
ASGDVYASRVSYASRCQSSGSVYTFLAPDDTRNARELISYLVDAGKEVHPRLRAIAKGTP
FY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggcacctggtgggacaaactgtgcgcaagcgacatgtttaaatacatgccagaagat
gagactgcggacttaagacaaaggggagctgaatataagtcctgtctcacgagcgatgca
gtgagctacatcgcaccgacaccaatgagcctgcatcgtttacgtccactcagtatatac
caggacgaatcatcgaagtggtccgcagctgatgtgaaagcttacaggatagcaaatgaa
ataacagttaccggacgtgccgtacccaagccaatctcacgacttgccgaggttgacatt
ccggatcacgtgactgaaggagctgaggcactagactactgtccactcacagccgtgcag
tctcagtgctggcccatcgctctcgcaggaagagaccttctcgccgtcatatacggtcaa
tcgggagaaaactcccgttcttacctgattccagccatcgtccacgtcatctcacaacca
actcctcagcctgtcaatggtccctgcgtgctcgttttagtcccgactcgtcaatcatct
gtgcaagtccaccgacaggtgacggattttgagaaatacgccactgtccacagcctgtgc
ctctgctctggagactggaaggaacgacagttgaagaggctcagcaaggcgagtttccag
atatggatcgctactcccagccggcttctatctttcatcgaaaacggcaaggtaagcctc
actagcacctgtacgttcctggtgctggacgaagtagatacaatgctagccgtgggtttc
gagaagaagcttcgcaccatcgcttcacttgtgggaccgacgcgccagacgctgatgttc
actgcgtctagaccaacagcgcttattcatatcgcggaagacttgctagaagactacgtt
caagtcggttttgggcagagcaagatagttgagaatgtcgagcatttcgtggtcttctgc
gagaagactgaaaaaatgaagcggctcgttgccctccttgacgacgttgtgaatgagaaa
gacgacaaggtgatcgtttttgctggaaataaacggtcagtggaagaaattgtgtcagaa
ctgcgtctccggggccggttagccatgagcattcatggcacgaagtcgcgattagaacga
gagtgggccttggatggacttaggtcgggagtggcgagtgttctcgttatgacggatgtt
atgacgcagcgtgtggttgacgtcggtgccgtgcactgcatcgtcaactacgaaaacccg
gccagcggagatgtctacgcgtccagagtgagctacgcgtctcgctgccaaagttcgggg
agcgtgtacacgtttctggcaccagatgacactcgcaacgccagggagctcatctcttac
ctggtggatgccgggaaagaagttcaccctcgtcttcgtgctattgccaaaggcacaccg
ttttattga
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