Roseomonas marmotae: IAI58_12005
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Entry
IAI58_12005 CDS
T08030
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IAI58_12005 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_12005 (ruvB)
Enzymes [BR:
rmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IAI58_12005 (ruvB)
DNA repair and recombination proteins [BR:
rmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IAI58_12005 (ruvB)
RecFOR pathway proteins
IAI58_12005 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
TIP49
AAA_16
DUF815
nSTAND3
Mg_chelatase
NB-ARC
Rad17
TsaE
AAA_33
AAA_18
NACHT
AAA_17
NTPase_1
RNA_helicase
AAA_14
AAA_28
DUF5955
Bac_DnaA
AAA_24
bpMoxR
Cytidylate_kin
ABC_tran
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QTI78411
LinkDB
All DBs
Position
complement(2539109..2540137)
Genome browser
AA seq
342 aa
AA seq
DB search
MSGSDRISDPHRSDEDAAEATLRPQTLDDFTGQKSLRENLSIFIQAARTRGEALDHVLLH
GPPGLGKTTLAQIVARELGVGFRATSGPVLQRAGDLAAILTNLQPRDVLFVDEIHRLQPA
IEETLYPAMEDFQLDLIIGEGPAARTVRIDLPPFTLVGATTRAGLLATPLRDRFGIPLRL
QFYTPEELLLIVRRGAQKLGFVLSEEGAQEIANRSRGTPRIAGRLLRRVRDFALVSGQVA
DRAMADDSLRRLEVDARGLDAQDRRYLRRIAEHHGGGPVGVETLAAALSEGRDTLEEVVE
PYLIQEGFVLRTPRGRVLGEPGWRHLGMTPPQGSQADLLGGF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagcgatcgcatttccgatccgcatcgctccgatgaggatgccgccgaggcc
acgctgcgcccgcagacgctggatgacttcaccggccagaagtcgctgcgcgagaacctc
tccatcttcatccaggccgcccggacgcgtggggaagccctggaccatgtgctgctgcat
ggtccgcccggcctgggcaagacgaccctggcgcagatcgtggcgcgggaactgggggtc
gggttccgcgccacctccgggccggtgctgcagcgggcgggcgacctcgcggccatcctg
accaatctgcagccgcgcgacgtgctgttcgtggacgagatccaccgcctgcaaccggcc
atcgaggagaccctctatcccgcgatggaggatttccagctcgaccttatcatcggcgag
gggccggcggcgcggacggtgcggatagacctgccgcccttcacgctggtgggcgccacg
actcgcgcggggctgctggccacgccgctgcgcgaccgcttcggcatcccgttgcgactg
caattctatacgcctgaagaacttctgctgatcgtccgccggggggcccagaagctgggt
ttcgtcctcagcgaggaaggggcgcaggagatcgccaaccgctcccgcggcacgccccgc
atcgccgggcggctgctgcgccgggtgcgggatttcgcgctggtctccggccaggtggcg
gatcgcgccatggccgacgactcgctgcggcggctggaagtggatgcgcggggactcgat
gcccaggaccgccgctacctccgccggatcgccgagcatcacggcggcgggccggtgggc
gtcgagaccctggcggccgcgctgtcggaggggcgggacacgctggaagaagtggtggag
ccctacctgatccaggagggcttcgtgctgcgcaccccgcgtggccgggtgctgggcgaa
cccggctggcgacacctgggcatgacgcctccgcaaggcagccaagcggatctgctggga
ggattctga
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integrated database retrieval system
