Ralstonia pseudosolanacearum RS: GO999_16125
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Entry
GO999_16125 CDS
T09041
Name
(GenBank) autotransporter domain-containing protein
Organism
rnc
Ralstonia pseudosolanacearum RS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
TIG
Cadherin_5
NtrZ
SprB
Motif
Other DBs
NCBI-ProteinID:
QUP59953
LinkDB
All DBs
Position
3481297..3486315
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AA seq
1672 aa
AA seq
DB search
MRKLIQTILLGWRLLAGLPMLGHLMARPCARTRQGVLAMLALGACQMMLSSPAWAAACTV
SFSTTANTQKSYVFTSGNTSSCDPFLIGIAYDSAGDANSSTGPVFNTATSQGGTIAIYNG
SVPPSGDPNTNGFVYTPPTNFSGTDTATFYTSNDGVTWLPNGTVSITVTSTAPTVTGISP
SSGGTGGGTSVAVTGTGFTGATAVKFGSTNAGSFTVNSATSITATSPAGSAGTVDLTVTT
SGGTSATSSADQFTYVAPPTANASSATVAHGSSSNAITLSISGGTPTSVAVSTAASHGTA
TASGTSITYTPTASYSGTDTFAYTASNAGGTSAAATVTITVSSATVSYAPASPAAGTVGT
AYSQSVASASGGTSPYTYALASGSLPPGLTLSTGGTLSGTPTSAGTFSFTVTATDSSTGT
GPFSATSGTLSLTIAAPTITVSPSTLTSPTVGAASSQSVSASGGTSPYTYAVTAGALPAG
MSLSSAGTLSGTPTAGGAFSFTATATDSTGGTGPYTGSRSYTLTVNAPTLSITPAAGSLS
ATSGVAYSQAFVAASGTAPYTYALSVNSGALPTGLSFNTATGVLSGTPTTAGTANFTVTG
TDSSTGTGPYTVSATYTLTTSAPTISLAPATLTGATVGTAYSQSVTASGGATPYTYAITS
GALPAGLSLNTGTGALTGTPTAAGTFSFTVRGTDANAFSGTRSYSLTVAAPTIALTPTTL
AGATVSSAYSQSVAASGGTAPYTYAVTSGALPAGLSLSSAGVLSGTPTAGGSFSVTISAT
DSTTGSGPFTGSRAYTLTVGSPTLTISPASTAGLTAMAGTSYSQSFSAGGGVSPYTYALT
VNTGTMPTGLSFHAASATLSGTPTTAGTVSFTVTATDGSSGAGPYAVSGTYTLTVSAPTL
TVAPATLPNPAIGTAYSQSITASNGTAPYTYAVTSGALPAGLSLSSAGVLSGTPTAGGSF
GFTITATDANSFTASRAYSITIGAATVALNPATVPGATLNTAYSQTFTASGGIGPYTYAV
ASGTLPAGVSLNSTTGVLSGTPTALGSSTFSIRATDSSTGAGAPYTGTRGYTLVVGQTIG
TAPPVTATTTSTAPVTLHPTANATGGPFSSVVIVAAPASGTAVVNGMDIVYTPTPTTSGN
VAFTFALVNTAGTSAPIQATVTVNAVPIAVAQKTASTAAGQAVNVDLTDGATGGPFTGAA
IVSVVPANAGTATIMQQTSQTTAGVKALAAAAPVYLLSFTPASAFSGTATLTYTLSNAVS
TSTPAVVQVSVAPRRDPSTDPDVNGLINAQIQAARRFATTQIANYHQRLEALHGTGRAPS
GNGLTVALPGPRGDAQARCQDVFGIAARDACLRGDSTAGKPAFTRGKRNADLQASRGDAD
AGPDLPGADATADASQPDLAFWTAGTLDFGFANTSAQRSGFRFTTGGITAGADYRVSDRL
SVGAGFGYGRDSTDIGNAGTKSTGDSYSVALYGSYRPLPTLFVDGVAGFGTLSFDSRRWV
SDANDYAMGSRNGHQVFASVSAGYEHRDSVWLFSPYGRLSVSESTLDPFSETSAGLNALT
YFQQTVTTVSGTLGLRTEYAQKTRWGTFLPYARVEYQHDFNGQSNAGLAYADLASAGPAY
YVMGSPYGRDRMQVGLGTKFRTGPLTFGLDYSVMVGMGGLQQGVRLTFAAPF
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagctgatacaaacgatcctgctcggctggcgcttgcttgccgggctgccgatg
ctcggacacctcatggcgcgcccgtgcgcccggacccgccagggtgtgctggcgatgctg
gcgctgggggcttgtcagatgatgctgtcgtccccggcatgggcggcggcgtgtacggtc
tccttctcgaccaccgccaatacgcagaagtcctacgtcttcacgagcggcaacacatcc
agttgcgacccgttcctgatcggcatcgcctacgattcggccggcgacgccaacagctcg
accgggccggtcttcaacacagcgacgtcgcagggcggcacgatcgcgatctacaacggt
tcggtgccgccgtcgggcgaccccaataccaacggcttcgtctacaccccgcccaccaat
ttctccggcaccgacaccgccaccttctacaccagcaacgatggggtcacctggctgccc
aacggcacggtgtccatcacggtgaccagcaccgcgccgaccgtgacgggcatctcgccg
tcctcgggcggcaccggcggcggcaccagcgtcgccgtgacgggcaccggcttcaccggc
gcgaccgccgtcaagttcggctcgacgaacgccggcagcttcacggtcaacagcgccaca
tcgatcacggccacctcgcccgccggctcggcgggaacggtcgatctcaccgtgaccacc
tccggcggcaccagcgcgaccagctccgccgaccagttcacctatgtcgccccgcccacg
gccaatgcgagcagcgccaccgtcgcccacggcagcagcagcaacgccatcacgctgagc
atcagcggcggcacgcccaccagcgtggccgtctcgacggccgccagccacggcacggcc
accgccagcggcacgtcgatcacctacacgcccacggcctcgtattcgggcaccgacacc
tttgcctacacggccagcaatgccggcggcacgtccgcggcggcaacggtgacgatcacg
gtgtccagcgccacggtcagctatgcgcccgcatcaccggcggccggcacggtgggcacg
gcgtacagccagtcggtggcctccgccagcggcggcacctcgccctacacctatgcgctc
gcgtccggctcgctgccgccgggcctgaccctgagcaccggcggcacgctcagcggcacg
cccacctccgccggcaccttcagcttcacggtcacggccacggacagcagcaccggcacg
gggccgttctcggccaccagcggcacgcttagcctgacgatcgcagcgccgaccatcacc
gtatcgcccagcacgctgacgagcccgacggtcggggcggcctcctcccagtccgtcagc
gccagcggcgggacgtccccctacacctatgcggtcacggccggcgcgctgccggcgggc
atgagcctgtcgtcggccgggaccctgtcgggcacgcccacggcgggcggcgcgttcagc
ttcacggcaacggccaccgacagcaccggcggcacgggcccctataccggcagccgcagc
tacacgctcacggtcaacgccccgacactgtcgatcacgcccgcggcgggcagcctgagc
gcgaccagcggcgtcgcctatagccaggcgttcgtcgcggccagcggcacggcgccgtac
acctatgcgctgtcggtcaactccggcgcgctgccgaccggcctgtcgttcaacaccgcc
accggcgtgctgtccggcacaccgaccacggccggcacggccaacttcaccgtcacgggc
accgacagcagcaccggcaccggcccctacacggtctcggcaacctacacgctgaccacc
tccgcgccgaccatctcgctcgcccccgccacgctgaccggcgccacggtcggcacggca
tacagccagagcgtgacggccagcggcggcgcgacgccgtacacctacgccatcaccagc
ggcgcgctgccggcggggctcagcctgaataccggcaccggcgcgctcaccggcaccccg
accgccgccggcacgttcagcttcacggtgcgcggcaccgacgccaacgccttcagcggc
acccgcagctacagcctcaccgtggccgcgcccaccatcgcgctgacgccgaccacgctc
gccggcgccacggtcagctcggcctacagccagagcgtggcagccagcggcggcaccgcg
ccgtacacctatgccgtgaccagcggcgccctgccggcgggtctgtcgctcagcagcgcc
ggcgtgctgtccggcacgccgaccgcgggcggcagcttcagcgtcacgatcagcgccacc
gacagcaccacgggctcgggtccgttcaccggcagccgggcctatacgctgacggtcggc
tcgcccacgctgaccatctcgccggcctccaccgccgggctgaccgccatggccggcacg
agctacagccagagcttcagcgccggcggcggcgtcagcccctacacctacgcgctgacg
gtcaacaccggcacgatgcccaccggcctgtcgttccatgcggcctcggccacgctgtcc
ggcacgccgaccacggccgggacggtcagcttcaccgtcaccgccaccgacggcagctcg
ggcgcgggcccctatgccgtgtccggcacctacacgctgacggtcagcgcccccacgctg
accgtggccccggcaaccttgcccaacccggccatcggcacggcctacagccagtccatc
acggccagcaacgggaccgcgccgtacacctatgccgtgaccagcggcgcgctgccggcc
ggcctgtcgctgagcagcgcgggcgtgctgtcgggcacgccgacggcgggcggcagcttc
ggcttcaccatcacggcaacggatgccaacagcttcaccgccagccgcgcctacagcatc
accatcggcgccgcgaccgtcgcgctgaatccggccaccgtgccgggcgccacgctcaac
acggcctacagccagacgttcacggccagcggcggcatcggtccgtacacttacgccgtg
gcctccggcacgctgccggccggcgtgagcctgaacagcaccaccggcgtactgagcggc
acgcccaccgccctgggcagcagcaccttcagcatccgggcaaccgacagcagcaccggc
gccggcgcgccctacaccggcacgcgcggctacacgctcgtggtcgggcagaccatcggg
accgcgccgcccgtgaccgcgaccaccacatccaccgcgccggtcacgctgcaccccacg
gccaatgcgaccggcgggccgttctcgtcggtggtgatcgtcgccgcgcccgcgagcggc
acggccgtggtcaacggcatggacatcgtctacacgcccaccccgaccacctcgggcaac
gtcgccttcaccttcgcgctggtcaacacggccggcacctccgcgccgatccaggcgacg
gtgaccgtcaatgccgtgccgatcgccgtggcgcagaagacggccagcacggcggcaggc
caggccgtgaatgtcgacctcacggacggcgccaccggcgggccgttcaccggcgcggcc
atcgtgtcggtggtaccggccaatgccggcacggcgaccatcatgcagcagacatcgcag
acgacggcgggcgtcaaggcgctcgcggcggccgcaccggtctacctgctcagctttacg
ccggcgagcgccttcagcggcacggccaccctgacctacacgctgtccaacgccgtctcc
acctccacgccggccgtcgtgcaggtgagcgtggcaccgcggcgcgatccgtccaccgat
ccggacgtcaacggcctgatcaacgcgcagatccaggccgcgcgccgcttcgccaccacc
cagatcgccaactaccatcagcggctcgaagccctgcacggcaccggccgcgcaccgtcg
ggcaacggcctcacggtggcgctgccgggcccgcgcggcgatgcgcaggcgcgctgccag
gacgtcttcggcattgccgcccgcgacgcctgcctgcgcggcgacagcaccgccggcaaa
ccggccttcacgcgcggcaagcgcaacgccgacctccaggcaagtcggggcgacgcggat
gccggccccgacttgccgggagccgacgccaccgccgacgccagccagccggacctcgcc
ttctggaccgccggcacgctcgatttcggcttcgccaacaccagcgcgcagcgctcgggc
ttccgcttcacgaccggcggcatcacggcgggcgccgattaccgcgtatccgatcggctc
tccgtgggcgcgggcttcggctacgggcgcgattcgaccgacatcggcaacgccggcacc
aagagcaccggcgacagctacagcgtcgcgctctacggcagctatcgtccgctgcccacg
ctgttcgtcgatggcgtggccggcttcggcacgctgagcttcgattcgcgccgctgggtg
agcgatgccaatgactacgcgatgggctcgcgcaacgggcatcaggtcttcgcttcggtc
tcggcggggtatgagcaccgcgacagcgtctggctgttctcgccatacggacgcctgtcg
gtgtcggaatcgacgctggacccgttcagcgagaccagcgccgggctcaacgcgctgacg
tacttccagcagacggtgacgaccgtgtccggcaccctgggcctgcgcacggaatacgcg
cagaaaacgcgctggggcacgttcctgccctatgcgcgcgtggagtatcagcacgacttc
aacggccagagcaacgccggcctcgcctatgcggacctggcatcggcgggccccgcctac
tatgtgatgggcagcccgtacggccgcgaccgcatgcaggtgggcctgggcaccaagttc
cgcaccggcccgctcacgttcggcctggactacagcgtgatggtcggcatgggtgggctg
cagcagggcgtgcggctgaccttcgcggcgccgttctga
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