Rattus norvegicus (rat): 100361710
Help
Entry
100361710 CDS
T01003
Symbol
Setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00310
Lysine degradation
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100361710 (Setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
100361710 (Setdb2)
Enzymes [BR:
rno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
100361710 (Setdb2)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100361710 (Setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100361710 (Setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
Pre-SET
SET
MBD
zf-HC5HC2H_2
Tup_N
Motif
Other DBs
NCBI-GeneID:
100361710
NCBI-ProteinID:
XP_038949803
RGD:
2319564
Ensembl:
ENSRNOG00000021680
LinkDB
All DBs
Position
15:complement(37731029..37782790)
Genome browser
AA seq
1008 aa
AA seq
DB search
MEEKIGDAKTFWMELQDDGKVDFMFEKAQDVLHSLKQKIKDGSATNGDYVQAMVLVNEAT
LSNSQTLEKDHTPVTQNEQKNKSNVFPSTSCENPSPEDCIILSTGRKGFLPVNNKTEGSG
EKEPPLHASFHHHVCSSACLREAPLSLKGENPLQLPLRCHFQRRHAKTNSPSAALHVNYR
TPCGRSLRNMEEVFHYLLETECNFLFTDNFSFNTYVQLTRNHPKQNEVVSDVDISNGVES
VSISFCNEVDNSKLPQFKYRTTVWPRAYHLNVSSMFSDSCDCSEGCIDIKKCACLQLTAK
NAKACPLSPDGECTGYKYKRLQRLIPSGIYECNLFCKCNRQMCQNRVIQHGPRVRLQVFK
SEKKGWGVRCLDDIDKGTFVCIYSGRLLSRATPEKTNIGESESEQQHTVKNSFSKKRKIE
VVCSDRQTHCESPKTEGCPPKFSSDLEEPVVEMNNRNISRTQRHSVIRRPKSKTDVFHYN
EKNMGFVCSYSAAPEEKNGFKPAQEHLDSKARRAHEDLSSSQVGYSEDKQLTESDVIDTT
TSREDTSPAYGCKHAAILNSKNTKKVLEVPVKTSQEEEPAASQSQQVSCGEELASERTKI
PSASLVQLSKESLFLLDASKEGNVGRFLNHSCYPNLWVQNVFVETHDRNFPLAAFFTNRY
VKARTELTWDYGYEAGTMPEKEILCQCFCQVTEKMEKRTCVLCPEGHDWSVIYFSPSANI
AAHENCLLYSSGLVECEAHDPFNIAKNFDVSSVLEKIWNGSTSKCSFCNNEGAIMGCDET
SCAKNYHLLCAKEDRAILQVGVKRTYKIFCPEHPPQQEETTERANGLSIKKRRGRKKRRS
LGPPAQPKTMKCRRSRRHVTGEALGQRDAAVKAPFLKKCLEAGLLTELFEQIQQKMISIH
GRFMDETASESDYEGIETLVFGCGLFKDTLIKLEEAIKSKTCEYEERLNQMKQKLEALAH
LQQNLHSFQECGDLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaattggtgatgcaaagactttctggatggagctacaagatgatggtaaa
gttgactttatgtttgagaaagcacaagatgtcctacattcactgaaacagaagataaaa
gatgggtctgccacaaatggagactatgtccaagcaatggttctggtaaacgaagcaact
ctgagtaacagtcagacactggaaaaagatcatacacctgtgactcagaatgaacagaaa
aacaaatcaaatgtgtttccctctacatcatgtgaaaacccctcccctgaggactgtatc
attctatctacaggaagaaaaggattcctccctgtgaacaataaaactgaaggttcgggg
gagaaggagccccctttgcatgcatctttccatcaccatgtgtgctccagtgcttgcctg
agggaagcgccactgtccttgaagggagaaaaccctctgcagctgccactcagatgtcac
ttccagagacgacatgcaaagacaaactctccctctgctgccctccatgtaaactataga
acgccctgcggacggagtctacgaaacatggaggaagttttccattacctgcttgaaacg
gagtgtaactttttattcacagacaacttttcttttaatacttatgttcagttaactcgg
aatcacccaaagcaaaatgaagttgtttctgatgtggatattagtaatggagtggaatca
gtgtcgatttctttctgtaatgaggttgacaatagtaaactcccacagtttaagtatagg
acgacagtatggccccgagcatatcatctgaacgtttccagcatgttttctgattcatgt
gactgttctgagggctgcatagacataaaaaagtgtgcatgtcttcagttgacagcaaag
aatgccaaagcatgtcccttgtcacctgacggagaatgtactggatataaatataaaaga
ctgcagagactcataccttctggcatttatgaatgcaacctgttctgcaagtgtaaccga
cagatgtgtcaaaaccgcgtcatccagcatggcccccgggtgaggctgcaggtgttcaaa
agtgagaagaagggctggggagtgcgctgcctggatgacattgacaaagggacatttgtg
tgcatttattcaggaaggttactgagcagagccactcctgagaaaactaacattggtgaa
agtgaaagtgagcagcagcacaccgtgaaaaattcattctctaaaaagaggaaaatagaa
gttgtatgttcagatcgtcaaacacactgtgaaagtcctaaaactgagggatgtcctcct
aagtttagcagtgatctcgaagagcccgttgtggaaatgaataatagaaatatttcaaga
actcagcgtcattcagtcattagaagacctaaatccaagacagatgtttttcattacaat
gagaaaaacatgggattcgtttgctcatattctgctgccccagaagagaagaatggattt
aaaccagctcaagaacacctggactctaaagctaggagagctcacgaggacttaagttca
agccaagttggatattctgaagacaagcagctgactgaatcagatgtgatagatacaact
accagtagagaagacacttccccagcatacgggtgtaagcacgcagccatattgaatagt
aagaacactaaaaaagtgcttgaagtccccgtaaaaacgtcccaagaggaagagcctgca
gcctctcaaagccagcaggtctcgtgtggtgaggagctggcaagtgaaaggacaaagatt
ccatctgcttccctggtgcagctcagtaaggagagtctgtttctattggatgcttcaaaa
gaaggaaatgtgggccgtttccttaatcacagttgctacccaaatctctgggtgcagaac
gtgtttgtagaaacccatgacaggaatttcccattggcggccttcttcaccaacaggtat
gtgaaagcaagaacagaactaacatgggattatggttatgaagctgggaccatgcctgaa
aaggaaatcctctgccaatgtttctgtcaggttacagagaagatggagaagaggacatgt
gtcctctgccctgaaggccacgactggagtgtgatttacttttcaccatcagcaaatata
gctgctcatgagaactgtctgctgtattcatcaggactggtggagtgtgaggcccatgat
ccatttaatatagctaaaaattttgatgtaagttcagtacttgagaagatctggaacgga
agcacgtcgaaatgctcattttgtaataacgagggagccatcatggggtgtgatgaaact
tcctgtgccaagaattaccacttactctgtgccaaggaggaccgcgcaattctacaagtt
ggagtcaaaagaacttacaaaatattttgcccagaacatcctccacaacaagaagagacc
actgaacgtgccaatggcctaagcatcaagaagaggagaggaaggaagaaacgacgttca
ttgggccctcccgcacagccaaaaacgatgaaatgcaggagatctagaagacatgtgaca
ggagaggctctcggccagagagatgcagctgtcaaagctccttttcttaagaaatgcctg
gaagcaggacttcttactgaattatttgaacagatacaacaaaaaatgatttcaattcat
ggaagattcatggatgagactgcttcagagtcagactatgaagggatcgagaccttagtg
tttggctgtggactatttaaagacacattaataaaattagaagaagcaatcaagagtaaa
acttgtgaatatgaagaaaggctgaaccagatgaagcagaagcttgaggcactcgcacac
ttacaacaaaacctgcactcatttcaagaatgtggggacctggacccctcaggctctacc
tcagggtccttgctacctcctgaggaccaccagtgcagatgccaggagtctcctgaagtg
caagcaggctcaggagacagcctgtga
DBGET
integrated database retrieval system
