Rattus norvegicus (rat): 100910102
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Entry
100910102 CDS
T01003
Symbol
Catsperb
Name
(RefSeq) cation channel sperm-associated auxiliary subunit beta isoform X1
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
100910102 (Catsperb)
04040 Ion channels [BR:
rno04040
]
100910102 (Catsperb)
Cilium and associated proteins [BR:
rno03037
]
Motile cilia and associated proteins
Sperm associated proteins
100910102 (Catsperb)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
100910102 (Catsperb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
Motif
Other DBs
NCBI-GeneID:
100910102
NCBI-ProteinID:
XP_063118765
RGD:
6500065
Ensembl:
ENSRNOG00000063175
LinkDB
All DBs
Position
6:complement(126148156..126526814)
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AA seq
1110 aa
AA seq
DB search
MEPPLIYVMLLLLGAFEFSSGVVHNKGKERTFFSCSGDGIYTGLHAIKLFLTTDNLKVYC
FFKNENQSPSQKILGLFTSGGLAPNMIIMNSTYYGTYHFKLSPFTDRLQWIIDIPREKIT
VNTDIAAVEQWIIKFTMHEGLNIYDTEGTLLDLVREPILQWNLGTEFIQNSITHLYAFVD
GIKVTRSPCANDVALIGLIMKPLLNGVFIGRTASGFWTYEECKWYDMTKLIYEGLKYEHQ
ILTVIDLVLTNHFLVILTSLGLYVSGDLRYPTTSQIKLSRIEFCGFERVDYIKGNLWYNE
KCFANREHFEVDYVTITFKRNRTLSESSSCFFSKEPFLHWLPCLYENYQNERDVPHVITF
LIDQETESGVYLMHIQSSRETYVTVSMLKDGSPSAHPKFPSFKFPSTFTHPVGMVFHPRS
HFLYVYGDKVWISMDGGNTFEILCNLVLNYVQETAHSFYTSDIAFILNDGKILMTKAGLN
RYNELGMLNDTIFTLYYDHLGYIHKLTPRSFDYGTNLLGHGNSVSIFGKAPDMGFETAIV
PQYISAKEMVFFAYVPLKTSKDLAQTMNFKNIHTGKTIEYSKSGIAYIRNVFSHDDPKGF
YTSVHTELIEPFGMEDSKESPCLHHPLEIKYSGNIFFTLTLTSQNIQEGFLSTDVEKTVL
IPGHSSFMITEVENMQTAKALATMPQTVKSTLNFPLGSWFLYNFGSIRGRNWTIGTKPCN
YWIQQDSLDFMSLNLVKYIDVGNTLNFQFKIIPTAKGMSTYPIPPVSVMIGNPSLLDVKA
QGFFDLFFNYYLNIHVSGKFFLKGSTTLALIFWEGSVSCLVISLLPTIKSSCSYLRTMQH
RPGRNIPPEDWISGVHKDSHGFNMIKTLPINYRPPSKMGISIPLTDNFYHADPSKPIPRN
RFHKSKETGKYKQCANVTSREMCNCSQHQKTSHAVAFSDCKEKVHRFKFPVTQYPVALEI
FNERDKISAEPPYLVTMTEVNMRENWQLKHNVPENVKKMKNYLEPLLKTPVYNPLGLNLS
IKGSELFHFRVSVVPGVSFCDLHEEFQIYVDEVPLPFPGHALIAVSTSVVLGGLIFMAFV
FQLRNIHPLRALKRSIMGNPVQTSTTTVNS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaccacttatatatgttatgcttttgcttttgggtgcatttgaattttcatca
ggagtagtacataataagggtaaggagcgaactttcttttcttgttctggtgatgggatc
tacacaggcctgcatgcaatcaagttgttccttaccactgacaatttgaaagtctactgt
ttcttcaaaaatgaaaaccaaagtccttcacagaaaattttgggtctttttacatcagga
ggccttgctcccaacatgataattatgaacagtacatactatggaacctaccattttaaa
ttatctccgttcaccgatcggttacagtggataattgatattcctagagaaaagatcaca
gtaaacacagatatcgcagctgtagaacaatggattataaagttcacaatgcatgaagga
ttaaacatttatgatacagaagggaccttattggaccttgtccgagagcctattcttcag
tggaatcttgggactgaatttatacagaatagtatcacacacttatatgcctttgtggac
ggtatcaaagtgacaaggagcccctgtgccaatgatgtggctttaataggccttattatg
aaaccattgttgaatggtgttttcataggcagaaccgcttctggattttggacttatgag
gaatgcaaatggtatgacatgacaaagctcatctatgaaggacttaagtatgaacaccaa
atacttacagtgatagatttggttttaacaaatcattttttggtcatcctcacctctttg
ggtctttatgtaagtggtgatcttcgttatccaaccacttcacagataaagctttcaaga
atagagttctgtggctttgaaagggttgattatatcaaaggaaacctgtggtataatgaa
aaatgttttgcaaacagagaacattttgaagtggattatgttactatcactttcaagagg
aacagaactctcagtgagtccagttcttgtttttttagtaaagagccatttcttcattgg
ttaccttgcttatatgaaaattatcaaaatgaaagagatgttccacatgtgataacattt
cttattgaccaagaaactgaaagtggagtttacctcatgcatattcaaagttccagagag
acctatgtcactgtatctatgctcaaggatgggagtccaagtgctcatccaaaatttcct
agtttcaaatttccttccacattcacacatccagttggaatggtgttccatccccgaagc
cactttctgtatgtttatggtgataaggtatggatttcaatggatggtggcaatactttt
gaaattctgtgtaacttagtcctaaactatgtccaggagactgctcatagcttttatacc
tcagacatagcttttattctaaatgatggaaagattttaatgacaaaagcaggattaaac
agatacaatgaattgggaatgcttaatgatacaattttcacattgtactatgaccatttg
ggatacatacacaaactgactccacgttcctttgattatggtacaaaccttttagggcat
ggaaattctgtcagtatttttggaaaggcgcctgatatgggatttgaaacggcaatagtt
ccacaatatatctctgccaaagaaatggttttttttgcatatgtacctctgaaaacgtct
aaagaccttgcacagacaatgaattttaaaaatattcacacgggaaaaacgatagagtat
agtaaatctggaattgcttatatcagaaatgtattttcacatgacgatccgaagggattt
tacacatctgttcacacagaattaatagaaccttttgggatggaggactcaaaggagagc
ccttgcttacatcatcctcttgaaattaaatattccggaaacatattcttcacactgact
cttacgtcacaaaatatccaggagggctttctttctacagatgtagagaagactgtgttg
atacctggccatagcagcttcatgatcacagaagttgagaatatgcagactgctaaagcc
ttggcaactatgcctcaaacagtaaaatcaacactgaactttccattaggttcttggttc
ttgtacaactttggctcaattagaggacggaattggaccataggtacaaagccatgtaat
tattggattcaacaagatagtcttgattttatgtcccttaatcttgtgaagtatattgat
gtgggaaacacactaaattttcaatttaagattattccaactgcaaaaggtatgtcaaca
tatcctatccctccagtctctgtgatgattggaaacccatcgttgttggatgttaaggca
caaggtttctttgacctcttttttaattattatctaaacattcacgtatctggcaaattt
tttctaaaaggttccactacactagcactgattttttgggagggatcagtttcatgcttg
gttatatcactgctcccaaccataaagagcagctgcagttacctcaggactatgcagcac
cgtcctggcaggaacataccacctgaagactggattagtggagttcacaaggacagccat
ggtttcaatatgatcaaaactctgccgataaactacagacctccatctaagatgggaatt
tctattccactcacagataatttttaccatgcagaccctagcaagcccataccgagaaac
cgatttcacaagtcaaaggaaactggcaaatacaaacagtgtgctaatgttaccagtcgg
gaaatgtgcaactgctcacaacatcaaaagacttcacatgctgttgctttctcagattgc
aaagaaaaggttcatcgtttcaagtttccagtcacacaatacccagttgctttggaaatt
ttcaatgaaagagataaaatctccgcagaacctccatatttggttaccatgactgaagtg
aatatgagggaaaactggcaactaaaacacaatgtgccagaaaatgttaagaaaatgaag
aattacttagaaccactacttaagaccccagtgtataatcctttgggtctcaacctaagc
ataaagggctctgagctgtttcacttcagagtgtctgtggttcctggagtcagcttttgt
gacttacatgaagaatttcagatttatgtcgatgaagtaccactgccttttccaggacat
gcactaatagctgtttcaacatctgtagtgctagggggactaatttttatggcatttgta
ttccaactgcgtaacatccacccattgagagcattgaagagatctattatgggaaatcct
gtacaaacctcaactacaactgtcaactcataa
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