Rattus norvegicus (rat): 170913
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Entry
170913 CDS
T01003
Symbol
Abcb1a
Name
(RefSeq) ATP binding cassette subfamily B member 1A
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
rno04976
Bile secretion
rno05206
MicroRNAs in cancer
rno05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
170913 (Abcb1a)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
170913 (Abcb1a)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
170913 (Abcb1a)
09162 Cancer: specific types
05226 Gastric cancer
170913 (Abcb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
170913 (Abcb1a)
04147 Exosome [BR:
rno04147
]
170913 (Abcb1a)
04090 CD molecules [BR:
rno04090
]
170913 (Abcb1a)
Enzymes [BR:
rno01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
170913 (Abcb1a)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
170913 (Abcb1a)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
170913 (Abcb1a)
CD molecules [BR:
rno04090
]
Proteins
170913 (Abcb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_29
G-alpha
AAA_14
AAA_7
AAA_30
APS_kinase
PRK
nSTAND1
AAA_15
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
170913
NCBI-ProteinID:
NP_596892
RGD:
619951
Ensembl:
ENSRNOG00000008012
UniProt:
A0A9K3Y745
Q9JK64
LinkDB
All DBs
Position
4:complement(26312403..26488456)
Genome browser
AA seq
1272 aa
AA seq
DB search
MELEEDLNGRADKNFSKMGKKSKKEKKEKKPAVSVLTMFRYAGWLDRFYMLLGTLAAIIH
GIALPLMMLVFGDMTDSFANVGNNRSMSFYNATDIYAKLEDEMTTYAYYYTGIGAGVLIV
AYIQVSLWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGD
KIGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELQAYA
KAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYA
SYALAFWYGTSLVISKEYTIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFSI
IDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKDVQILKGLNLKVKSGQTVALVGN
SGCGKSTTVQLLQRLYDPIEGEVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENI
RYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRN
PKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVE
QGNHDELMREKGIYFKLVMTQTAGNEIELGNEACESKDGIDNVDMSSKDSGSSLIRRRST
RKSIRGPHDQDGELSTKEALDDDVPPASFWRILKLNSTEWPYFVVGVFCAIINGGLQPAF
SIIFSKVVGVFTKNDTPEIQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRL
RYMVFKSMLRQDISWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVITQNIANLGTGII
ISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV
SLTREQKFETMYAQSLQIPYRNALKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVAREL
MTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHIIRIIEKIPEIDSYSTEGLKP
NMLEGNVKFNGVMFNYPTRPNIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYD
PMAGTVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSHEEIVKA
AKEANIHQFIDSLPEKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDT
ESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGQVKEHGTHQQLLAQKGIYF
SMVSVQAGAKRS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgaagaagaccttaacggaagagcagacaagaacttctcaaagatgggcaaa
aagagtaaaaaggagaagaaagaaaagaaaccagcggtcagtgtgctcacaatgtttcgc
tatgcaggttggctggacagattttacatgctgctgggaactctggcggccattatccat
ggaattgcgctcccacttatgatgctggtctttggagacatgacagatagctttgcaaat
gtaggaaacaaccgtagtatgagtttctacaatgctacagacatatatgccaagctggag
gacgaaatgaccacgtacgcctactattacacgggcattggtgccggtgtgctcatcgtt
gcctacatccaggtttcactttggtgcctggcagctgggagacaaatacacaagattagg
cagaagtttttccatgccatcatgaatcaggagataggctggtttgacgtgcatgacgtt
ggggagctcaacacccggctcacagatgacgtctccaaaattaatgaaggaattggtgac
aaaattggaatgttctttcaggcaatggcaacattttttggtggttttataataggattt
actcgcggctggaagctaactcttgtgattttggccatcagccctgttcttggactgtca
gctggtatttgggcaaagatattgtcttcatttactgataaggaactccaggcttatgca
aaagctggagcagttgctgaagaagtcttagcagccatcagaactgtgattgcctttgga
ggacaaaagaaggaacttgaaaggtacaataacaatttggaagaagctaaaaggcttggg
ataaagaaagctatcacggccaacatttccatgggtgcagcttttctgcttatctatgca
tcatatgctctggcattctggtatgggacttccttggtcatctcaaaagaatacactatt
ggacaagtgctcactgtctttttttctgtattaattggagcattcagtgttgggcaggca
tctccaaatattgaagccttcgccaatgctagaggagcagcttatgaagtcttcagtata
attgataataagcccagtatagacagcttctcaaagagtgggcacaaacccgacaacata
caaggaaatttggaattcaaaaatattcacttcagttacccgtctcgaaaagacgttcag
atcttgaagggcctcaacctgaaggtgaagagcgggcagacggtagccctggttggcaac
agtggctgtgggaaaagcacaactgtccagctgctgcagaggctctacgaccccatagag
ggcgaggtcagtatcgacggacaggacatcaggaccatcaatgtgaggtatctgcgggaa
atcattggggtggtgagtcaggaacccgtgctgtttgccaccacaattgccgaaaacatt
cgctatggccgagaaaacgtcaccatggatgagatagagaaagctgtcaaggaagccaat
gcctatgatttcatcatgaaactgccccacaaatttgacaccctggttggtgagagaggg
gcgcagctgagtgggggacagaaacagaggatcgccattgcccgggccctggtccgcaac
cccaagatccttttgttggatgaggccacgtcagccttggacacagaaagcgaagccgtg
gttcaggccgctctggataaggctagagaaggccggaccaccattgtgatagctcaccgc
ttgtctacagttcgcaatgctgatgtcattgctggttttgatggtggtgtcattgtggag
caaggaaatcatgatgagctcatgagagagaaaggaatttacttcaaacttgtcatgact
cagacagcaggaaatgaaattgaattaggaaatgaagcttgtgaatctaaagacggaatt
gataatgtggacatgtcttcaaaagattcgggatccagtctaataagaagaagatcaact
cgcaaaagcatccgtgggccacatgatcaagacggggaacttagcaccaaagaggctctg
gatgacgacgtacctccagcttccttttggcggatcctgaagttgaattcaactgaatgg
ccttattttgtggttggtgtattttgtgccataataaatggaggcttgcaaccagcattc
tccataatattttcaaaggttgtaggggtttttacaaaaaatgacacccctgaaatccag
cggcagaacagcaacttgttttctttattgttcctgatccttgggatcatctctttcatt
acgtttttccttcagggcttcacatttggcaaagctggagagatcctcaccaagcgactc
cgatacatggtcttcaaatccatgctgagacaggacataagctggtttgatgaccctaaa
aacaccacaggagcgctgaccaccaggcttgccaatgacgctgctcaagtgaaaggggct
acagggtctaggcttgctgttattacccagaacatagcaaatcttgggacaggcatcatc
atatccctgatctacggctggcaattgacacttttactcctagcaattgttcccatcatt
gctatagcaggagtggttgaaatgaaaatgttgtctggacaagcgctgaaagataagaag
gaactagaaggttctgggaagatcgctacagaagcaattgaaaactttcgcactgtcgtc
tctttgactcgggagcagaagtttgaaactatgtatgcccagagcttgcagataccatac
agaaatgctttgaagaaagcgcacgtctttgggatcactttctccttcacccaggccatg
atgtatttctcctatgctgcttgtttccggtttggtgcctacttggtggcacgagaactc
atgacatttgaaaatgttctgttagtattctcagctattgtctttggtgccatggcagtg
gggcaggtcagttcattcgctcctgactacgcgaaagccaaagtctcggcatcccacatc
atcaggatcattgagaaaatccctgagattgacagctacagcacggagggcttgaagcct
aatatgttggaaggaaatgtgaaatttaatggagtcatgttcaactatcctacccgaccc
aacatcccagtgcttcaggggctgagcctagaggtgaagaaagggcagacgctggccctc
gtgggcagcagtggctgcgggaagagtacagtggtccagctgcttgagcgcttctatgac
cccatggccggaacagtgtttctagatggcaaagaaataaagcaactcaatgtccagtgg
ctccgcgcccacctgggcattgtgtcccaggagcccatcctgtttgactgcagcatcgcc
gagaacattgcctacggagacaacagccgtgtcgtgtctcatgaggagatcgtgaaggca
gccaaggaggccaacatccaccagttcatcgactcactgcctgagaaatacaacaccaga
gtgggagacaaagggactcagctgtcgggcgggcagaagcagcgcatcgccatcgcgcgc
gccctcgtcagacagcctcacatcttacttctggatgaagcgacatcagctctggatacg
gagagtgaaaaggtcgtccaggaagcgctggacaaagccagggaaggccgcacctgcatt
gtgatcgcgcaccgcctgtccaccatccagaacgcagacttgatcgtggtgattcagaac
ggccaggtcaaggagcacggcacccaccagcagctgctggcccagaaaggcatctatttc
tccatggtcagtgtgcaggctggagcaaagcgctcatga
DBGET
integrated database retrieval system
