Rattus norvegicus (rat): 290519
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Entry
290519 CDS
T01003
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
290519 (Thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
290519 (Thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
290519 (Thoc3)
03041 Spliceosome [BR:
rno03041
]
290519 (Thoc3)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
290519 (Thoc3)
Spliceosome [BR:
rno03041
]
Complex C
Other components
EJC/TREX
290519 (Thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
290519 (Thoc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
RMC1_N
NBCH_WD40
PD40
Coatomer_WDAD
Nup160
Peptidase_S9_N
Cytochrom_D1
DPPIV_N
IKI3
DUF359
Motif
Other DBs
NCBI-GeneID:
290519
NCBI-ProteinID:
NP_001099529
RGD:
1311669
Ensembl:
ENSRNOG00000000104
UniProt:
A6KB01
F7EUM8
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All DBs
Position
17:10148281..10157472
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AA seq
351 aa
AA seq
DB search
MAVPAAVLGPSALSQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcccgccgctgtcctggggccctctgccctcagccagagcggccccgggtcg
atggcgccctggtgctcggtgagcagtggcccgtctcgttatgtgctcgggatgcaggag
ttgttccgaggccacagcaagactcgtgagttcccggcgcacagtgccaaggtgcactcg
gtggcctggagctgcgacggtcgtcgcttggcctcgggatctttcgacaagactgccagc
gtgttcttgctggagaaggaccggctggtcaaggaaaacaactaccgtggacatggggat
agcgtggaccagctctgctggcatccaagcaaccctgacctttttgtcaccgcatctgga
gataaaaccattcgcatctgggatgtgaggactacaaaatgcatcgccactgtgaacacg
aaaggggagaacattaacatctgctggagtcccgacgggcagaccattgcagtgggcaac
aaggatgatgtcgtgacctttattgacgccaagacgcaccgttccaaagcggaggagcag
ttcaagtttgaggtcaatgagatctcgtggaacaacgacaacaacatgttcttcctgacc
aatggcaacggctgtatcaacatcctcagctacccagaactgaagcctgtgcagtccatc
aatgcccacccttctaactgcatctgtatcaagtttgaccccatggggaaatactttgcc
acaggaagtgcggatgccttggtcagcctctgggacgttgacgagctagtgtgcgtgcgg
tgcttttccagactagattggcctgtgaggaccctcagttttagccacgatgggaaaatg
ctggcgtcggcttcggaggaccatttcattgacatagctgaagtagagacaggagacaag
ctgtgggaggtgcagtgtgagtccccgactttcaccgtggcttggcaccccaagaggcct
ctgctggcttttgcctgcgacgacaaagatggcaagtacgacagcagccgggaggctggg
accgtgaagctcttcgggcttcccaatgactcctga
DBGET
integrated database retrieval system