Rattus norvegicus (rat): 294236
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Entry
294236 CDS
T01003
Symbol
Gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03022
Basal transcription factors
rno03420
Nucleotide excision repair
rno05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
294236 (Gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
294236 (Gtf2h4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
294236 (Gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
294236 (Gtf2h4)
03400 DNA repair and recombination proteins [BR:
rno03400
]
294236 (Gtf2h4)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
294236 (Gtf2h4)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
294236 (Gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
294236
NCBI-ProteinID:
NP_997666
RGD:
1303309
Vega:
OTTRNOG00000001603
UniProt:
Q6MG20
LinkDB
All DBs
Position
20:3076110..3081805
Genome browser
AA seq
463 aa
AA seq
DB search
MEITPARGGLNRAHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagatcacccccgcgaggggtggactgaaccgagcacacctacaatgcaggaatcta
caggagttcttaggcggcctgagccctggggtgctggaccgattgtatggacaccctgcc
acttgtctggctgtcttcagggagctcccttccttggctaagaactgggtgatgagaatg
ctctttctggagcagcctctaccacaggctgccgtggccctgtgggtgaagaaggagttc
agcaaggctcaggaggaaagtaccgggctgttgagtggcctccgtatttggcatacccag
ctgctccccggtggactccagggcctcatcttgaaccctgtcttccgccagaacctccga
attgctcttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgcccgggatgtcccctcacttgataagtacgccgaggagcgctgggaggtggtc
ttgcatttcatggtgggctcccccagtgcagctgtcagccaggacctggctcaactcctc
agccaggccgggcttatgaaaagcaccgaacccggagagccaccgtgtatcacttccgct
ggcttccagttcctgctcctagacacgcctgcccagctctggtacttcatgctgcagtat
ctgcagacagcccagagtcggggcatggatctagtggagattctctccttccttttccag
ctcagtttctctactcttggcaaggactactccgtggaggggatgagtgattctttgttg
aacttcctgcaacacctgcgtgaattcgggcttgttttccagaggaagaggaagtcccgg
cgttactaccccacacgcctggccatcaacctctcatctggtgtctccggggctgggggc
actgtgcaccagcctggcttcattgtcgtcgaaaccaattacagactgtatgcctatacc
gagtcggagctgcagatcgccctcattgctcttttctccgagatgctctatcgattcccc
aacatggtggtggcacaagtgacccgggagagcgtgcagcaggccatcgccagtggcatc
actgcccagcagattatccatttcctaaggaccagggcccatccagtgatgctcaaacag
actcctgtgctgccccccaccataacagaccagattcggctgtgggagctggaaagggac
agacttcggttcactgaaggcgttctgtacaaccagttcctatcgcaagtggactttgaa
ttgctgctggcccacgcgcgggagctgggcgtgctcgtgttcgagaactcggccaagcgg
ctgatggtggtgacaccggcggggcacagcgacgtcaagcgcttctggaagcggcagaag
cacagctcctga
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