Rattus norvegicus (rat): 302920
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Entry
302920 CDS
T01003
Symbol
Rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
302920 (Rbfox1)
Spliceosome [BR:
rno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
302920 (Rbfox1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
302920
NCBI-ProteinID:
NP_001100444
RGD:
1311210
Ensembl:
ENSRNOG00000002827
LinkDB
All DBs
Position
10:complement(8658809..10754648)
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AA seq
416 aa
AA seq
DB search
MLASQGVLLHSYGVPMVVPAAPFFPGLMQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQSADTSAQTVSGTATQTDDAAPTDGQ
PQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFV
TFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKAVNPYTNGWKLNPVVGAVYSP
DFYAGTVLLCQANQEGSSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYN
TFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYSDSYGRVYAADP
YHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtcgcaaggagtccttctgcattcttatggcgtgcctatggttgtgcctgct
gcccccttcttcccgggactgatgcagggtaatcaggaagcagcggccgcccctgacaca
atggctcagccttatgcctcagcgcagttcgctccaccccagaatggcatccctgcagaa
tacacggcccctcatccccatcccgcgccagagtacaccggccagaccactgtccccgac
cacacattaaacctgtatcctcctacacagacgcactcggagcagagcgctgatacaagc
gcacagaccgtctccggcaccgccacacagacagatgatgccgccccgaccgacggccag
ccccagacacaaccttctgaaaacacagaaaacaagtcccagcccaagcggctgcatgtg
tccaacatccccttccggttccgggatccagacctccgacaaatgtttggccaatttggt
aaaatattagatgttgaaattatttttaatgagcggggctcgaagggatttggtttcgta
actttcgaaaatagtgcggatgcggacagggcgagggagaaattgcacggtaccgtggta
gagggccgtaaaatcgaggttaataatgcgacagcacgcgtgatgactaataaaaaggcc
gtgaacccctacaccaatggctggaaattaaatccagttgtgggcgcggtctacagcccc
gacttctatgcaggcacggtgctgttgtgccaggccaaccaggagggatcttccatgtac
agtggccccagttcacttgtatatacttctgcaatgcctggctttccatatccggccgcc
actgctgcagctgcataccgaggggctcaccttcgaggccgtggtcgcaccgtgtacaac
accttcagagctgcggcgcccccacccccaatcccggcctatggcggtgttgtttaccag
gatggattttatggtgcagacatttatggtggttacgctgcataccgctacgcccagccc
acccctgccactgctgctgcctacagtgacagttacggacgagtttatgctgccgacccc
taccaccacacacttgctccagcccccacctacggcgttggtgccatgaatgcttttgcg
cccttgaccgatgccaagactaggagccatgctgatgatgtgggtctcgttctttcttca
ttgcaggctagtatataccgagggggatacaaccgttttgctccatattaa
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