Rattus norvegicus (rat): 308896
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Entry
308896 CDS
T01003
Symbol
Usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
308896 (Usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
308896 (Usp47)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
308896 (Usp47)
Peptidases and inhibitors [BR:
rno01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
308896 (Usp47)
Ubiquitin system [BR:
rno04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
308896 (Usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
308896
NCBI-ProteinID:
NP_001101012
RGD:
1310411
Ensembl:
ENSRNOG00000026754
UniProt:
B2GVC1
F1MAA1
LinkDB
All DBs
Position
1:175586758..175669904
Genome browser
AA seq
1355 aa
AA seq
DB search
MVPGEENQLVPKEIENAAEEPRVLCIIQDTTNSKTVNERITVNLPASTPVRKLFEDVANK
VGYINGTFDLTWGNGINTADLAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEQPQMLLD
DSSHVDDSVHDRFIGPLPREGSVASTSDYVSQSYSYSSILNKSETGYVGLVNQAMTCYLN
SLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSF
GWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR
IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL
HFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTFIDIEDEKSPQTESCTDSGAE
NEGSCHSDQMSNDFSTDDAVDEGICLESSTGSEKISKPGLEKNSLMYELFSVMVHSGSAA
GGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLI
YRLKDPTRNAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPVKQV
MMENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVKYDEFHDYLERSYEGEEDTPM
GLLLGGVKSTYMFDLLLETRKPDQIFQSYKPGEVMVKVHVVDLKAETVAAPVTVRAYLNQ
TVLEFKQLISKATHLPAEPMRIVLERCYNDLRLLSMPSKTLKAEGFFRSNKVFVESSETV
DHQAAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRTAYQKAGGDSGNVDDDCERAK
GPAGSLKSVDAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERGSSTS
VDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADSAQIP
LANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKADPYT
ADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYTSNQEFETVRLNET
LSSFSDDNKITIRLGRALKKGEYRVKVCQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELI
PQLREQCGLDLSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMK
SMSQLAILTRRWRPSEMKLDPFQELVLESNSVDELREKLSEISGIPLEDIEFAKGRGTFP
CDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDRTEEVMELTDEQRNELMKKES
SRLQKTGHRVTYSPRKEKALKIYLDGAPNKDVAQD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaggagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacaggacactactaactcaaagacagtgaatgaacggatc
acagtgaatttaccagcatctaccccagtcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaacggaacctttgatttgacatggggaaatggaatcaatactgctgat
ttggcaccactggatcacaccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggagaacagcctcagatgctattggat
gactccagtcacgtggacgacagcgtgcatgacaggtttataggtccacttccaagagaa
gggtctgtggcttctaccagtgattatgtcagccagagctactcctattcatcaattttg
aacaagtcagaaactggttatgtgggattagtaaaccaggcgatgacgtgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgccttatataagtgggag
tttgaagagtctgaagaagatcctgtaacgagcatcccataccagcttcagaggcttttt
gttctgttacaaaccagcaaaaagagagcaattgagaccacagatgtcacaaggagcttt
ggatgggatagcagtgaggcttggcaacagcatgatgtacaagaactgtgccgtgttatg
tttgatgctttggaacagaaatggaagcaaacagaacaggctgatcttataaatgagctg
taccaaggcaaactgaaagactatgtgaggtgtctggaatgcggttatgaaggctggaga
attgacacgtaccttgatattccactggtcatccgaccttatgggtctagccaagcattt
gccagtgtggaagaagcattgcatgcatttattcaaccagagatcttggatggcccaaat
caatacttctgtgaacgttgtaagaagaagtgcgatgctcgtaagggccttcggtttttg
cactttccctatctgctgactttacagttgaaaaggtttgattttgattatacaaccatg
catagaattaaactgaatgatcgaatgtcatttccagaggagctggatatgagcacattt
attgatattgaagatgagaaatctcctcagactgaaagttgcactgatagtggagcggaa
aatgaaggcagttgccacagcgaccagatgagcaatgatttctccacggatgatgctgtt
gatgaagggatatgcctggagagcagtactgggagtgagaagatttcaaaacctggcctg
gaaaagaactccctgatgtatgagctcttctcggtgatggtacattcagggagtgctgct
gggggacactattatgcttgcataaagtctttcagcgacgatcagtggtacagtttcaat
gaccaacatgtgagcaggataacacaagaagacattaagaagacacacggtgggtcttca
ggaagcagaggctactactccagtgcttttgcaagctcaacaaatgcatatatgctgata
tacagactgaaggatccaacaagaaatgcaaaatttctggaagtggatgagtacccagaa
cacattaagaacctggtgcagaaggagagagaattggaagaacaggaaaagaggcaacga
gaaattgaacgaaacacatgcaagataaaattattctgtttacatcctgtgaaacaagta
atgatggaaaacaagttggaggttcataaggacaagacattaaaggaagcagtagaaatg
gcttataagatgatggatttagaagacgtgattcccttggattgctgtcgcctggtaaaa
tatgatgagtttcatgattacctggaacgatcctatgagggagaagaagatacgccaatg
gggctgcttctaggaggagtcaagtcaacgtacatgtttgatctgctgttggagacaaga
aagcctgatcaaatttttcagtcttataaacctggagaagtgatggtgaaagttcatgtt
gtcgatctgaaggcagagactgtcgctgctcctgtaacagtgcgtgcttatttaaatcag
acagttttggagttcaaacagctgatctcaaaggccacacacttacctgcagaacccatg
aggatcgtgctggagcgctgctacaacgacctgcgcctgctcagcatgcccagcaagacc
ctgaaggctgagggcttctttagaagtaacaaggtgtttgttgaaagctctgagacagta
gatcaccaggcagccttcacagactcccacttgtggaaactcctggatcgacatgcaaat
acaatccggttatttgttttgctgcctgaacaatctccagggtcttattcgaaaaggaca
gcataccagaaagctggaggggattctggtaatgtggacgatgactgtgaaagagccaag
ggacctgcaggaagtttaaagtctgtggatgccattctagaagagagcactgaaaaactc
aaaagcctgtcactgcagcagcagcaggatggggacaacggagacagcagcaaaagcact
gagacaagtgactttgagaatattgaatcccctctcaatgagaggggctcttccacctct
gtggataatcgagaacttgaacaacacattcagacttctgacccagaaaactttcagtct
gaagaacgctcagactcagatgtgaataatgaccggagtacaagttcggtagacagcgat
attcttagctctagtcacagcagcgacactttgtgcaatgcagacagcgctcagattcct
ttggccaatggactcgattctcacagtatcacaagtagtagaagaactaaggcaaacgaa
gggaaaaaggagacatgggacacagctgaagaagactctgggactgacagtgaatatgat
gagagtggcaagagcaggggggagatgcagtacatgtacttcaaagctgacccctacact
gcggacgaaggctctggggaaggacacaaatggttgatggtgcatgttgataagagaatc
accctggcagctttcaaacagcatttagagccttttgttggagtcctctcctctcacttc
aaggtttttcgagtgtacaccagcaatcaagagtttgagaccgtccggttgaatgagacc
ctttcatcattttcagatgacaataagatcacaatccgactggggagagcactgaagaag
ggagagtacagagttaaagtgtgccagctcttagtcaatgagcaagagccatgcaagttt
ctgctagacgccgtatttgctaaaggcatgactgtgcggcaatcgaaagaggagctgatt
cctcaactcagggagcagtgtggcttagacctcagcatcgacaggtttcgtctaaggaag
aaaacatggaagaatcctggcactgtttttttggattatcatatttatgaagaagatatt
aatatttctagcaactgggaagttttcctggaagttcttgatggtgtggagaagatgaag
tccatgtcacagcttgccattttaaccagacggtggaggccttcggagatgaagttggat
cccttccaggagcttgtgttggagagcaatagtgttgatgagcttcgagagaagctgagt
gaaatcagtgggattcctttggaagacattgaatttgccaagggtaggggaaccttcccc
tgtgatatttctgtccttgatattcatcaagatttggactggaaccctaaagtctctacc
ttgaatgtgtggcctctttatatctgtgatgatggtgccgtcatattttatagggataga
acagaagaagtaatggaattgacagatgagcaaaggaatgaactgatgaaaaaggaaagc
agccgactgcagaagacgggacatcgtgtgacatactcccctcgcaaagagaaagcactc
aagatctacctggatggggcgccaaataaagacgtagctcaagactga
DBGET
integrated database retrieval system