Rattus norvegicus (rat): 309452
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Entry
309452 CDS
T01003
Symbol
Nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04010
MAPK signaling pathway
rno04064
NF-kappa B signaling pathway
rno04380
Osteoclast differentiation
rno04625
C-type lectin receptor signaling pathway
rno05134
Legionellosis
rno05166
Human T-cell leukemia virus 1 infection
rno05169
Epstein-Barr virus infection
rno05200
Pathways in cancer
rno05203
Viral carcinogenesis
rno05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
309452 (Nfkb2)
04064 NF-kappa B signaling pathway
309452 (Nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
309452 (Nfkb2)
09158 Development and regeneration
04380 Osteoclast differentiation
309452 (Nfkb2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
309452 (Nfkb2)
05203 Viral carcinogenesis
309452 (Nfkb2)
09162 Cancer: specific types
05224 Breast cancer
309452 (Nfkb2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
309452 (Nfkb2)
05169 Epstein-Barr virus infection
309452 (Nfkb2)
09171 Infectious disease: bacterial
05134 Legionellosis
309452 (Nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
309452 (Nfkb2)
Transcription factors [BR:
rno03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
309452 (Nfkb2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
309452
NCBI-ProteinID:
NP_001008350
RGD:
1307189
Ensembl:
ENSRNOG00000019311
UniProt:
A6JHL7
A6JHL8
LinkDB
All DBs
Position
1:255106010..255114649
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AA seq
898 aa
AA seq
DB search
MDRCYDPGLDGIPEYDDFEFSPSIVEPKDPAPETADGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSKPQGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGSAGGYGGAGGGGSLGFFSSFAYSPYQSGAAPMGCFPGGGGGAQMAGSGRDAEAGEAEE
QPRAPSEAPQSEQQALDTLQRAREYNARLFGLAQRSARALLDYGVTADARALLAGQRHLL
MAQDENGDTPLHLAIIHGQTGVIEQIAQVIYHAQYLGVINLTNHLHQTPLHLAVITGQTR
VVSFLLQVGADPTLLDRHGDSAVHLALRAGAAAPDLLQAVLHSGAHALPQMLHMPDFEGL
YPVHLAVHARSPECLDLLVDCGAEVEAAERQGGRTPLHLATEMEELGLVTHLVTKLHANV
NARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSEGPE
TDTQRNFRGHTPLDLTRSTKVKTLLLNAAQNTTEPPLAPPSPAGPGLSLGDAALQNLEQL
LDGPEAQGSWAELAERLGLRSLVDTYRKTPSPSGSLLRSYKLAGGDLVGLLEALSDMGLH
EGVRLLKAPETRDKLPSTEVKEDSAYGSQSVEQEAEKLCPPPEPPGGLCHGHPQPQVH
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttgctacgatccaggtttggatggcatccctgaatatgatgattttgaattc
agcccctccattgtggagcccaaggatccagccccagagacagctgatggcccctatctg
gtgattgtggaacagcctaaacagcgaggcttcagatttcgatatggctgtgaaggcccc
tcccatggaggtctgccaggtgcctccagtgagaagggccggaagacctatcctactgtc
aagatctgtaactacgaggggccggccaagattgaggtggacctggtgacacacagtgac
ccaccccgtgcacatgcccacagtctggtgggcaagcagtgctctgagctgggggtgtgt
gccgtgtctgtgggacccaaggacatgactgctcaatttaataatctgggtgtcctgcat
gtaaccaagaagaacatgatggagattatgattcagaaactccagaggcagcggctccgc
tccaagcctcagggccttacagaggccgagcgccgggagctggagcaggaggccaaggag
ctgaagaaagtcatggatttgagcattgtacggctacgcttctcagctttccttcgagct
agtgatggctccttctccctgcccctgaagcctgtgatctcccagcccatccacgacagc
aagtctccaggggcctcaaacctgaagatttcccgaatggacaaaacagcaggttccgtg
cgcggtggagacgaagtttatttgctttgcgataaggtgcagaaagatgacattgaggtt
cgtttctatgaggatgacgagaacggatggcaagcctttggggacttctctcccacagac
gttcataaacagtatgccattgtgttccggacaccgccctatcacaagatgaagattgag
aggcctgtaacggtgttcctgcagctgaaacgcaagcgtgggggcgatgtctccgactcc
aaacagttcacgtattaccctctggtggaagacaaggaggaagtacagaggaagcggaga
aaggccttgcctaccttctcccagcccttcgggggcggatcccacatgggtggaggttct
gggggctccgctgggggttatggaggcgctggaggaggtggcagcctcggctttttctcc
tccttcgcctacagcccctaccaatccggtgcagccccaatgggctgcttcccgggtggg
ggaggtggagcgcagatggccggctctggacgggacgcggaggctggcgaggcagaggag
cagcccagagcaccctccgaggccccccagagcgagcagcaggccctggacacgctgcag
cgagctcgcgagtacaacgcgcgcctgttcggtctggcgcagcgcagcgcccgagcgttg
ctggactacggcgtcaccgcggacgcgcgtgctctgctagcgggacagcgccacctgctg
atggcacaggacgagaacggagacacgccgctgcacctggccattatccatgggcagact
ggtgtcattgagcagatagcccaagtcatttatcatgctcagtaccttggggtcatcaac
ctcaccaatcacctgcaccagacacctctgcacctggcagtaatcactgggcagacacgg
gtggtgagcttcctgctgcaggtgggtgcagaccccacactgctggatcgccatggtgac
tcagctgtccacttggctctccgggcaggtgctgcagccccagacctgctgcaggcagtg
ttgcacagtggagcccacgctctgccccaaatgttacacatgcctgattttgagggacta
tacccagtacacctggcggtccatgcccgaagccctgagtgcctggatctgttagttgac
tgtggagctgaagtggaggcagcagagaggcaaggaggccgaaccccactgcatctagcc
acagagatggaggagctggggttggtcacccatctggtcaccaagctccatgctaatgtg
aatgcccggacctttgctggaaacacacccctccacctggcggctggacttggatcccca
accctcacccgcctccttctaaaggctggtgctgacatccatgcggagaatgaagagcct
ctctgcccactgccctcaccccctacctctgggagcgattcagactctgaggggcctgag
acagatacccaaagaaacttccgaggccatacccctcttgacctcactcgcagtaccaag
gtgaagaccctgctgttgaacgctgctcagaacaccacggagccacccctggccccaccc
agccctgcagggccagggctgtcactgggggatgcagccctgcagaacctggagcaactg
ctagatgggccagaagcccagggcagctgggcagagctggcagagagactggggctgagg
agcctggtggacacatacaggaagaccccctcccccagtggcagtctccttcgtagttac
aagctggctggtggagacttggtgggtctattggaagccttgtccgacatgggtcttcat
gagggagttaggctgctgaaggcgcctgagacccgagacaagctgcccagcacagaggtg
aaagaagacagtgcctacgggagccagtcagtggagcaggaggcagagaagctgtgtcca
ccccctgagcctccaggagggctctgccacgggcacccccagcctcaggtgcactga
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