Rattus norvegicus (rat): 311384
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Entry
311384 CDS
T01003
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D precursor
KO
K06842
semaphorin 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
311384 (Sema6d)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
311384
NCBI-ProteinID:
NP_001101238
RGD:
1310910
Ensembl:
ENSRNOG00000004812
UniProt:
D3ZDA2
A6HPV2
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All DBs
Position
3:131801680..132394578
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AA seq
990 aa
AA seq
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MRFFLLWFCVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNDIPQTEVIPSKDECHNFIKVFVPRNDEMVFVCGTNAF
NPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFADGKLYSATVADFLASDAVIYRS
MGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKN
DMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPTVIGVFTTQLN
SIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKT
SIDFPDDTLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAIEVDRSAGPYQNYTVIFV
GSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDRDHHALYV
AFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGVCERVTLGMLLLTEDFFAFHNH
SAGGYEQDTEYGNTAHLGDCHGVRWEVQSGDSNQMVHMNVLITCVFAAFVLGAFIAGVAV
YCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLT
SRKELPPNTDPKSMAMDHRGQPPELAALPTPESTPVLHQKTLQAMKSHSDKAHGHGASRK
EHPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNAHKAEKKLQNVDHPLTKS
SSKREHRRSVDSRNTLNDLLKHLNDPNSNAKAIMGEIHMAHQTLMLDPVGPMSEVPPKVP
NREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAVPKNLNS
PNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLK
RTPSLKPDVPPKPSFVPQTTSVRPLNKYTY
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctttctgctgtggttctgtgtgctgttccttctggtctccaggttacgggcc
gtcagcttccctgaggacgatgagccccttaacacggttgactaccactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcataggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtctatacagtg
aacttaaatgacatcccccaaacagaggtgatcccgagcaaggatgaatgtcacaacttc
atcaaagtctttgtcccaagaaatgatgagatggtttttgtctgtggcaccaacgctttc
aacccgatgtgcagatactataggttgagtaccttagagtatgatggggaagaaattagt
ggcctggcacggtgcccgtttgatgcccgacaaaccaatgttgccctctttgctgatggg
aaactgtattctgccacagtggctgatttcctggccagtgatgctgtcatttacagaagc
atgggtgatggatcggccctccgcacaataaaatacgactccaaatggatcaaagaacca
cactttcttcacgccatagaatatggaaactatgtctatttcttcttcagagaaatcgcc
gtggaacataataacttaggcaaggctgtgtactcccgagtggcccgcatttgtaaaaac
gacatgggtggctcacagcgggtcctggagaaacactggacttccttcctgaaggctcgg
cttaactgctcagtccctggagattcctttttctacttcgatgttctgcagtccatcaca
gacatcatccaaatcaatggcatccccaccgtgatcggggtcttcaccacgcagctcaac
agcattcctggctctgcagtctgtgcctttagcatggacgacattgagaaagtgttcaaa
gggcggttcaaagagcagaaaaccccagactctgtttggacagcggttcctgaagacaaa
gtaccaaaaccaaggcctggctgttgtgccaaacatggcctcgcggaagcttacaaaacc
tccatcgactttccagatgataccctgtctttcatcaagtcccacccgctgatggactcc
gctgtcccacccattgctgatgagccctggttcacaaagactcgggtccggtacaggctg
acagccatcgaagtggaccgttcggcagggccgtaccaaaactacacagtcatctttgtt
ggctctgaggccggcgtggtgcttaaagttttggcaaagaccagtcctttctctttgaac
gacagtgtattactcgaagagatcgaagcttataacccagccaagtgcagcgccgagagt
gaggaggacaggaaggtcgtctcgttacagctggacagggatcaccatgctttatacgtg
gccttctccagctgcgtggtccgcatccccctcagccgctgtgagcgctatggctcctgt
aaaaagtcttgcattgcatcacgagacccgtactgtggttggttaagccagggagtgtgt
gagagagtgaccttagggatgctgctgttaaccgaagacttctttgctttccataaccac
agtgctggaggatatgagcaggacaccgagtatggcaacacggcccacctaggggactgc
cacggtgtacggtgggaagtccagtctggagattccaaccagatggtccacatgaatgtc
ctcatcacctgcgtgtttgcagcttttgtcttgggcgcgttcatcgcaggagtggctgtg
tactgctatcgtgacatgtttgttcggaagaacagaaagatccataaagatgcagaatcg
gcccagtcatgcacagattccagtggaagctttgccaagctgaatggtctctttgacagc
cccgtcaaggagtaccagcagaacatcgattcacccaaactgtacagcaacctgctgacc
agtcggaaggagctgcctcccaacacggatccaaagtccatggccatggaccatcgaggc
cagcctccagagctggctgctctccccacgccagagtctacacctgtactccaccagaag
accctgcaggccatgaagagccactccgataaggcccatggccatggtgcttcaaggaag
gaacacccccagttttttccttctagtcctccaccccattccccgttaagtcacgggcat
attcccagtgccatcgttcttccaaacgccactcatgactacaacacatccttctcaaac
tctaacgctcacaaagccgaaaagaagcttcagaacgttgatcaccctctcacaaagtca
tccagtaagagggaacaccggcgctctgtggactccagaaacaccctcaatgatctcttg
aagcatctcaatgacccaaacagtaacgccaaagccatcatgggagaaatccacatggcc
catcagaccctcatgctggacccagtgggaccaatgtctgaggtcccacccaaggttcct
aaccgggaggcatccctatactcccccccctcaacactccccagaaatagtccaaccaag
agagtagatgtccccaccactcctggggtcccaatgacttctctggaaagacaaaggggt
tatcacaaaaactcctcccagaggcactctatatctgccgtgcctaaaaacttaaactca
ccaaacggtgttttgttatctagacagccgagtatgaaccgtggaggatatatgcccacc
ccaacaggggcgaaggtggactatattcaggggacaccggtgagtgtccatctgcagccc
tccctctccagacagagcagctacaccagtaatggtaccctacccaggacgggactaaag
aggacaccatccttaaaacctgatgtgccaccaaagccttcctttgttcctcaaaccaca
tctgtcagaccactgaacaaatacacttactag
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