Rattus norvegicus (rat): 311607
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Entry
311607 CDS
T01003
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
311607 (Chd6)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
311607 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
311607
NCBI-ProteinID:
NP_001101267
RGD:
1310465
Ensembl:
ENSRNOG00000016744
UniProt:
D3ZA12
LinkDB
All DBs
Position
3:complement(170016204..170177480)
Genome browser
AA seq
2698 aa
AA seq
DB search
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGENIEEAANHCLPQKD
FYTTEEEADTLFSRKLMSHNGMEDNGGRGTGVKKKRKKKEPGEQEGTKASKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKEAKQKDGVKKPRKPREASGTKEGKEKRSCTDCGPRTKP
KKASKDQGPTPVERKKKGKRKNETTVESLELDQSLPNPSLQSPEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKPVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVVIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLTFGWGRWKDILTHGRFKWPLNEKDMEVICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKTA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSDIPERGNIDKEDSAEDKVDGLQKQTASPSDGSDGIFGEKKDDSQAVSSAL
TARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRTSDMDLINKEAQKRWTRRE
QADFYRTVSSFGVVYDQEKEAFDWTQFRAISRLDKKSDENLEHYFHSFVAMCRNVCRLPT
WKDDGPPDASIYVEPITEERAAKTLYRIELLRKVREQVLTCPQLHERLQLCRPSLYLPVW
WECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTDTQAPGSLCCLYQ
GNSKLYESLTYTPMSRTSESLESEPENLVKMDSRDDHLCLPEAGLPDITCENFVSKVQEV
ISLDHDESLLPESLENMMYGKTGLSQEPRSFQEAPSTNMQSRKKTVTVSASRDESCQLPG
IEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISEEGEPCCSETGRSPESRGRLEARCL
ASPTLDTGHESGFVDLCSLSVYDSKRNFSSDQQLIDLLENKSLENKLILNQSDEEEEENE
KETLAIVASTTEKPAVLDFTQPTASIPRGKNLSFHQDEAKKGRLEVGSKTPGPQRAFPPS
ANQCHCKHIERWAHGLGSEESEGEKPKAYEPDPYRSKANNTTVEGEPAIIPTEPFKLKHE
LLKEPWKESSEGGKSFSMYVPEGSEPKSEEMDFENKDDYEKDGACHSQDYPGKYSEEESK
SSASGIAGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRLDNICHVVLKGKWP
CSHQYEPSGALPTPVLSSSAGSRSSLSEPEATEHSFSNGAALAAQIQKESFLAPVFTKDE
QKHRRPYEFEVERDAKARSLEEYSASHGRPPIVLNGWHGESAIDLSCSSEGSPGATSPFP
VSASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKHI
EGGMDLIFLKEQTLQAGILEVHEDAGQTTLNTTHPEGPGAASSASEPTAAASSQAEKAVP
SKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDIGSLGGEERVSAVPKEP
GLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRNELLKAPAIVADSPSGMGPLFMNGLIA
GMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEDVKNTLSMLPMMLPGMATVPQMFGV
GGLLNTPMATTCTTTASASLASTKSGASATEKTTEDELSGRDVKADSLVEDKPGPSPFSD
QSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQGRHSEMAGLETQKR
KKKKTKGDNPTPEPASVCEREPGSDQNCTESSVTVSPEREHVAQAREEGLKDSNDDTN
NT seq
8097 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaagagctttgaatcac
tccccaatgtcggatgcctccgttaactttgactacaaatcaccatcaccattcgattgc
agtcctgatcagggagagaacattgaagaagctgccaatcattgtctgccccagaaggac
ttctatactactgaagaggaagctgacacccttttttctaggaagttgatgtcccataat
gggatggaggataatggaggcagaggcactggagtaaagaagaaacggaagaaaaaggag
ccaggggagcaagaggggacaaaggctagcaaggacagggagcctaagccaaagaggaaa
cgagaacctaaagagccaaaagaacccagaagggccaaggagcctaagagagccaaggag
cccaaggaggcaaagcagaaagacggcgtgaagaagccccggaagccccgggaggcctcc
ggtaccaaggagggtaaagagaagaggagctgcactgactgtggacccaggacaaagccc
aagaaggccagcaaggatcaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaatgaaaccaccgtggagagtttagagctggaccagagtcttccaaacccatctctg
cagagtcctgaggagcccagtgagtctgcagacagccagaaacggcgctcaggacggcaa
gtaaagcgtagaaaatataatgaggacctggacttcaaggtcgtggacgatgatggggaa
acaatcgctgttctgggagcaggccggacatctgcactctctgcttccaccctggcctgg
caggctgaggagcctccagaagatgatgcaaacatcattgagaaaatcctggcatccaag
actgtccaggaggttcacccaggagaacctccattcgacctagagcttttctacgttaag
tatagaaatttctcctatttacattgtaagtgggccacaatggaagagctggaaaaggat
ccccgcatcgctcagaagatcaagcgctttaggaacaaacaggcccagatgaagcatatt
tttactgagcctgatgaagacttgttcaatccagattatatagaaattgatcgtatcttg
gaggtggcccacaccaaggatgcagaaacaggggaggaagtgacccattacctggtaaaa
tggtgctctctgccgtatgaagaaagcacatgggagctagaggaagatgtggatcctgca
aaagtgaaagaatttgaatctctacaaattctccctgaagttaagcctgtggaacgacct
gcctctgatgcatggcagaaactggagacctctcgtgagtataagaacagtaaccggctg
cgggagtaccagctcgagggcatgaactggctgcttttcaactggtacaacagaaaaaac
tgtattttggctgatgaaatgggcctagggaaaaccatccagtccatcgcattcctttca
gaaatctttgtcaggggaatccatggcccctttctcatcattgcccctctttccaccatc
actaactgggagcgagaattccggacatggacagagatgaatgctattgtgtaccacggc
agccagatcagcaggcagatgatccagcagtacgaaatggtatacagagatgcacagggg
aaccccctttcaggagttttcaagttccatgtcgtcatcacaacattcgagatgatcctg
gcagattgcccagagctgaagaagattcactggagctgtgtggtaattgatgaggcccac
agattgaagaataggaactgtaaacttctggaagggttaaagctcatggccctggaacac
aaggtgctactcacaggaacgcccttgcagaactcagtggaagagctcttcagtttgctt
aactttctggagccctcacagtttccttcagagactgctttcttagaggagtttggtgat
ctcaaaacagaagaacaggtaaagaaattgcagtctatcctaaaaccaatgatgcttcgg
cgcctgaaagatgatgtggagaagaaccttgctcccaagcaggagaccatcattgaagta
gaactgaccaatatccagaaaaagtactaccgtgctatcctagagaaaaacttctccttc
ctgaccaaaggtgcaaatcagcacaacatgcccaaccttatcaatactatgatggagctg
agaaaatgctgcaaccacccctacctgatcaatggggcagaggaaaagattctggaagat
ttcaggaaagcccacagctctgaagcctctgacttccagctacaggccatgatccaggcg
gcggggaagctggtgctcattgacaagcttctccccaagctcattgctggcggccacaaa
gtgctcatcttctctcagatggtgcgctgtctcgacatcctggaggactatctcatccag
agacgatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcg
ggaggcctgggaatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgacttgcaggctcaggcccggtgtcatcgtataggccagagcaaagcc
gtaaaggtatatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agcctgaagctgggcctggacaaggctattcttcaggacatcaacagaaagggcagcacc
aatggagtgcagcagctctcaaaaatggaagtagaagatttgctccggaaaggtgcttat
ggagctttaatggacgaggaggatgaaggctccaagttctgtgaagaggacatagaccag
attctgcagagacggacccacaccatcaccatccagtcagaagggaagggctccactttt
gccaaggctagttttgtggcttcaggaaacagaacagatatttccttggatgatcccaat
ttttggcagaaatgggctaaaatagctgagttagacactgaagcaaataatgaaaaggaa
agcttagtgattgaccggccacgggtgaggaaacagaccaaacactacaactcatttgag
gaggatgagcttatggagttctcagagttagacagtgactcggatgaaaggcccacacgg
tccaggcgcctcagtgacaaagccaggcgctacctccgcgctgagtgcttccgagtagag
aagaacctgctcacctttggctggggccgctggaaggacatcctgactcacggacgattc
aagtggcccctgaatgagaaggatatggaggtgatttgccgggctctgctagtatactgc
gtgaagcattacaaaggagatgagaaaatcaagagttttatttgggaactaatcacacct
tccaaagacggacaggttcagaccctccagaaccactcaggcttgtctgccccagtcccc
agagggaggaaaggaaaaaagacgaaaaaccagctgttgctcccagaactgaagactgca
gactggttggccacttgcaatcccgaggtggtcttacatgatgatgggtacaaaaaacac
ctcaagcagcactgtaacaaggtgcttttgagagtccggatgctgtactacctaaaagct
gaaatattaggagaagcagctgataaagcctttgagggaactcctgccagagagctggat
gtccttctgcccgacattgactatgtggagatcccagtagattggtgggatgctgaagct
gataagtcccttctcattggtgtgttcaagcacggttatgagaggtacaatgccatgcgg
gctgacccagcactctgtttcctggagaaagtcggcatgcctgatgagaagtccctttct
gcagagcagggtgttacagatggaacctcagacattcctgaaagaggcaacatagataaa
gaagacagtgctgaggacaaggtagatggtctccagaagcaaacggcgagtcccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagtttcctctgccctc
actgctcgactaaggcgtctggtcactatttaccagcgctgcaaccgcaaggagctgtgc
agacctgaaatcctaggcccaggtaaccaaggatactgggttcaggaggaggtgttcagg
agaacttcagacatggacctcatcaacaaggaagcccaaaaaaggtggactagaagagaa
caagccgacttctatagaaccgtgtcttccttcggtgttgtgtatgaccaggaaaaggaa
gcctttgactggacgcagttccgcgccatttctcgcttggacaagaagtcagatgagaac
ctggagcactattttcatagttttgtagccatgtgtcggaatgtgtgtcgtcttcccaca
tggaaagatgatggtccccctgatgccagcatctatgttgagcccatcaccgaggaacgg
gcagcaaagactctgtaccgcattgaactactgaggaaagtccgtgagcaggtgctcacg
tgtcctcaactgcatgagcgcctccagctttgcagacccagcctctacctcccagtctgg
tgggaatgtgggaaacatgatcgagacctgcttattggcaccgccaaacatgggctcaac
cgcactgactattacatcatgaatgacccccagctgtccttcctagatgcctatagaaac
tatgcccaacacaaaagaactgacacccaggctcctggaagtctctgttgcctttaccag
ggcaattctaaactatatgagtctcttacttatacgccaatgagtaggacttcagagtct
cttgaaagtgagccagagaatctggtaaaaatggacagcagggacgatcatctctgcctg
cctgaggctggtctgcctgacataacctgtgaaaactttgtttccaaagttcaggaagtc
atttctctggaccatgatgaaagcttgctgccggagtctttggagaacatgatgtatggc
aagacaggactcagccaggagccacgatcttttcaggaggccccaagtaccaacatgcag
tccaggaaaaagactgtcaccgtctcagccagcagagacgagagctgccagcttcctggt
attgaggcagaaattacttcagcttcctctctcatgagcagcttagaagcaggagtggcc
aagatgaatattaaaaatggaaagcatttgttggtatcgatctcagaagaaggggagccc
tgctgcagcgagacagggcggagccctgaaagcagaggccgcctggaggccagatgctta
gcttcccctaccttagatacagggcacgaaagtgggtttgtagatctgtgcagccttagt
gtctatgactccaaaagaaacttctcatcagatcagcaattaattgatttattagaaaac
aagagtttagaaaataagttgattttgaatcagagtgatgaggaagaggaagaaaatgag
aaggaaaccttagccatagtagccagcaccacagaaaagccagcggtcttagatttcacc
cagcccactgcaagcatcccaaggggaaagaacctcagcttccaccaagatgaagccaag
aaaggaaggctggaggtgggaagcaagactcctggaccacagagggcctttcctccctca
gccaatcagtgccactgcaaacacattgaaaggtgggcacatggcctggggagtgaggaa
tctgaaggagagaaacccaaggcttacgagccagacccgtacagaagcaaagccaataat
accacagtggaaggtgagcctgctattattccaacagagccatttaaactgaagcatgag
cttttaaaagaaccgtggaaagaaagttcagagggggggaagagtttctccatgtatgtt
cccgagggaagtgaacccaaatcagaagaaatggattttgagaataaagatgattatgag
aaggatggagcctgccacagtcaagactacccaggcaaatactctgaggaggagagtaag
agttcggcatcaggcattgcaggagaccttggggaagaggcacaggaagtgcgggctccc
accattgctcagctcctgcaggaaaaaaccctctattccttctcagagtggccaaaggac
cgtgtgataattaaccgcctagataatatttgccatgtggtgttaaaggggaagtggccc
tgcagccaccagtatgagccctcaggtgcactgcccacgccagtgttatccagcagtgca
ggttctcgaagcagcctctcagagccagaagcaaccgaacacagcttcagcaatggtgca
gcattggcagcccagatccaaaaggagagcttcttagccccagtattcacaaaagatgaa
caaaagcacagacgtccctatgagtttgaggtggaaagggatgccaaagctcggagccta
gaagaatactctgccagccatgggcgtccccccattgtcctcaatggctggcatggggag
tcagctatagacctctcctgctcatcagaggggtctccaggagccacatctcctttccca
gtaagtgccagcacccctaagattggtgctatcagctcacttcaaggagccctcggtatg
gacttgtctggaattctgcaagctggcctaatccacccagtaactggacagatcgtcaat
ggaagcctcaggagggatgatgctgccatgagaaggcgaagagggagacgaaaacatatt
gaaggagggatggacctcatctttctgaaggagcaaacacttcaggctggaatcttggaa
gtccatgaagatgcaggacagactaccctgaacaccacacaccctgaagggccaggagct
gcttcctcagcttctgagccaacagcagcagccagcagccaggctgagaaagctgttccc
agcaagagcctacttgactggctgcggcagcaggctgactactccttggatgttcctggc
tttggggcaagtttttcagacaaacccaagcagaggagaccacgctgcaaagaacctgga
aaattagacatcggctctctaggtggagaagagagggtttctgctgtccccaaggagcca
ggactaagggggtttctcccagaaagcaaattcaatcacaccctagccgaacctgtgctt
cgagatgcaggcccccgcaggagggggaggcggcctcggaatgagctcctaaaagctcca
gccattgtagcagactctccttctggaatgggaccactgttcatgaatgggctgattgca
gggatggacctggtaggattgcagaatgtgagaaatattccaggcattcctctcactggg
ctggtgggcttcccagctggttttgccaccatgcctactggtgaagacgtcaaaaacacc
ctgagcatgctgcccatgatgctgccaggcatggccacagtgccccagatgtttggtgtt
ggcggactcctcaacacacccatggcaaccacctgcacgaccactgcatcagcgtctctc
gcaagcacaaaaagtggtgcctcagccactgaaaaaactacagaggacgagctgagtggc
cgtgatgtgaaagcagacagtctggtcgaagataagcctggccctagtccattttctgat
cagtctgaacccacaataactacaagtagtcctgtggctttcaacccatttctcatccca
ggagtatctcctggactcatctacccctccatgtttctctcccctggcatgggcatggct
ctgccagccatgcagcagggtagacactcagagatggccggtctagagacccagaagagg
aaaaagaagaaaacaaagggggacaaccccaccccagagcctgcttctgtgtgtgagagg
gagccaggcagtgatcagaactgcaccgagtccagtgtcactgtgtccccagagagagaa
cacgtggcacaggccagggaagaggggctcaaagactctaacgatgataccaattag
DBGET
integrated database retrieval system