Rattus norvegicus (rat): 315958
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Entry
315958 CDS
T01003
Symbol
Stag1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
315958 (Stag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
315958 (Stag1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
315958 (Stag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAG
SCD
RFX5_DNA_bdg
Motif
Other DBs
NCBI-GeneID:
315958
NCBI-ProteinID:
NP_001101649
RGD:
1310744
Ensembl:
ENSRNOG00000015389
UniProt:
D4A3Q2
A6I2F7
LinkDB
All DBs
Position
8:110057981..110443666
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AA seq
1122 aa
AA seq
DB search
MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPSTNKKPRKSPGEKSRI
EAGIRGVGRGRANGHPQQNGEGDPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDL
INFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCE
FIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLV
YSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAH
PPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFD
LEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQ
LIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL
KTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKYYNDYGDIIKETLSKTRQIDK
IQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLDQIKTREAVAT
LHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKKTVHSYLEKFLTEQMME
RREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRSKKGRPPLHRKRAEDESLDN
TWLNRTDTMIQTPGPLPTPQLTSTVLRENSRPMGEQIQEPESEHGSEPDFLHNPQMQISW
LGQPKLEDLNRKDRTGMNYMKVRAGVRHAVRGLMEEDAEPIFEDVMMSSRSQLEDMNEEF
EDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagagttaccagtgttacaggattcaactaatgaaactactgcccattct
gatgctggcagcgaacttgaagaaacagaggtcaaaggaaagagaaaaaggggtcgtcct
ggccggcctccatcaacaaataagaaacctcgaaaatctccaggagaaaagagcagaatt
gaagctggaattagaggagtgggtcgcggaagagctaatgggcaccctcaacagaacggc
gaaggggatcccgtcaccttatttgaggtggtgaagctggggaagagtgcaatgcagtct
gtggtggatgactggattgaatcatataaacaagaccgggacatcgcacttctggattta
atcaacttttttatccagtgttcaggatgtcgaggtactgtcagaatagagatgtttcga
aatatgcagaacgcagaaataatcagaaaaatgactgaagaatttgatgaggacagtggt
gactacccccttaccatgcctggtcctcagtggaaaaaatttcgttccaatttttgtgaa
tttattggagtcctgattcgacagtgtcaatatagcataatttatgatgaatatatgatg
gacaccgtaatttcccttttgactggtttgtcagactcccaggtcagagcttttaggcat
acaagtacccttgctgcaatgaagctgatgactgctctggtgaatgttgccttaaacctc
agtattcatcaggataatacacagaggcaatacgaagccgagagaaataaaatgattggg
aagagagccaatgaaaggctggagttactacttcagaaacgtaaagagctacaagaaaat
caagatgaaattgaaaatatgatgaactctatttttaagggtatatttgttcatagatac
cgtgatgcaattgctgaaattcgagccatctgtattgaagaaattggagtatggatgaaa
atgtatagcgatgccttcctcaatgacagttacctgaaatatgtaggatggactcttcat
gataggcaaggtgaagtcagactgaagtgtttgaaagctctacaaagcctgtataccaat
agagaattattccccaaattggagctgtttactaatcgattcaaggatcgcattgtatca
atgactcttgacaaagaatatgatgttgctgtggaagccatccggttggttactctgata
cttcatggaagtgaagaagctctttccaatgaagactgtgaaaacgtctaccatttggtg
tactcagcacatcgccctgttgctgtggcagctggagagtttctgcacaaaaagctgttt
agcagacatgacccacaagctgaggaagcattagcaaagagaagaggaagaaacagtcca
aatgggaacctcattaggatgcttgttcttttctttcttgaaagtgagttacatgaacat
gcagcctacttggtggacagcttgtgggagagctctcaagaactgttgaaagactgggaa
tgtatgacagagttactattagaagaacctgttcaaggagaggaagccatgtctgaccgt
caggagagcgctcttatagagctaatggtctgtacaattcgtcaagcagctgaggcacat
cctccagtgggaaggggaaccggcaagagagtgctaacagccaaagaaaggaaaactcaa
attgatgatagaaataaattaactgaacattttatcattacacttcctatgttactatca
aagtattctgcagatgcagagaaggtagcgaacttgctgcagattccacagtattttgat
ctggaaatctacagcacaggtcggatggaaaagcacctggatgctttattaaaacagatt
aagtttgttgtagagaaacatgtagagtcagatgtcctagaagcctgcagtaaaacctac
agcattttatgcagtgaagagtacaccattcaaaatcgagtcgatattgctcggagccag
ctcattgatgaatttgtagatcgattcaatcattctgtagaagacctattgcaagagggt
gaagaagctgatgatgatgatatctacaatgttctttccaccttaaagcgtttaacttct
tttcacaatgctcatgatctcactaaatgggatctgtttggtaattgctacagactattg
aagactggaattgaacatggagctatgccagaacagatagtcgtacaagcactgcagtgt
tcccattactcaattctttggcagctggtgaaaattactgatggttctccttccaaatat
tacaatgactatggtgatattattaaggaaaccctgagtaagaccaggcagattgataag
attcagtgtgctaagactctcattctcagtctacaacagttgtttaatgaacttgttcaa
gaacaaggtcctaatctggataggacatcggcccatgtcagtggaattaaagaactggca
cgtcgttttgcccttacatttggattggaccagatcaagacccgagaagcagttgccaca
cttcacaaggatggaatagagtttgcctttaaataccagaatcagaaaggacaagagtat
ccacctcctaatctggcttttcttgaagtactaagtgaattttcttctaaactccttcga
caggacaagaaaactgtccattcctatcttgaaaaattcctcactgagcagatgatggaa
aggagggaggatgtatggcttccactcatctcgtatagaaattcgttagtcactgggggt
gaagacgacagaatgtctgtgaacagtggaagtagcagcagtaaaacttcctcagtgcgc
agtaagaaaggaagacccccactgcacagaaaacgagcagaagatgaaagtctggataac
acatggctaaataggactgacacaatgattcagactcctggacccttgccaaccccacag
ctcacctccactgtacttagagagaacagccgtcccatgggagagcagattcaggagcct
gagtctgagcatggttctgaaccagactttttacacaatccccagatgcagatctcttgg
ttaggccagccgaagttagaagacttgaatcggaaggacagaacaggaatgaactacatg
aaagtgagagctggagtaaggcatgctgttcggggtctaatggaggaagatgctgagccc
atctttgaagatgtgatgatgtcatcacggagccagttagaagacatgaatgaagaattt
gaagacaccatggttattgatttgcccccatcaagaaatcggcgagagcgagctgagcta
aggccagacttctttgactctgcagctatcatagaagatgattcaggatttggaatgcct
atgttctga
DBGET
integrated database retrieval system