Rattus norvegicus (rat): 361646
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Entry
361646 CDS
T01003
Symbol
Katnip
Name
(RefSeq) katanin-interacting protein
KO
K22858
protein JBTS26
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
361646 (Katnip)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Other cilium assembly proteins
361646 (Katnip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4457
Motif
Other DBs
NCBI-GeneID:
361646
NCBI-ProteinID:
NP_001382684
RGD:
1595846
Ensembl:
ENSRNOG00000016635
LinkDB
All DBs
Position
1:189700838..189867402
Genome browser
AA seq
1610 aa
AA seq
DB search
MDGQALRKVERSRSCSQERKEGYSKDMVTDFDEKHDEYLILLQQRNRILKHLKAKDPVQL
RLEHLEQGFSVYVNGANSELKTSPRKAVHTDFSRSASQAEGSQDYGRRTLFREAEEVLRC
SSRTAPGKVQRRGWHQKSVQIRTEAGSRLHIEPPLDCSEDFESHEDVIDKHEDATGDHTQ
ELRKGLGLSTSLQTQEDGSSDEYDSIEEDVLSETETEDPVLPVYARDECPLPSHDAVLKD
VPKDQELEGRPPQTTDTLVVMEFNPASKSNKMERILSAKRKENAEVFILSKPESVLNPQP
PAVFPDQERACSRSGSRRDRPLSATRKACAAEDREEDASAVLKAIQVENAALQQVLLSQD
PELQTSPQQDAKEPPVKSRPSLLKAKEDIPEPLAVTPVTTNPELCRTAGGAKAVSQALDR
MSPLGSRQQHKLLGVLQTVESDTTHPSQVAIPTEKPGPDPEEKWKARIDEIEDAIYVTME
ILSNWGNASWVGLTEVQFFDLNNIKLYVSPHDVDIRNAVLPGELGCLVNRDLVSKKDPPV
WTCPFHPPLQLYFIIHNMQQLRDFGLATIKVRNYWTADGDLDIGAKNVKLYVNKSLLFDG
VLEKGGGEAPFDCTIPVDLQSEKNENPEKALRTDWKESKGALKMAATGKDKELGLSCLQP
AESLDMSVSSQGDFLGEKVNATYCPKKSLSKLQEDVRLLATPASMGDGPSVPSSSSPGKC
LPLEEELSFIQQLENLRSRKIPEPTGKTPHWLQPSLTGMGKKQTVRKPKPLWLSPEKDLE
QKSRLPSYDVIGDASGEVEAREKGPRREQGRSSSWNVITEERPPKASSKACGSDLDIFSQ
PPSRDRPASGRRALKKDASSSHGDDRPASKEDAQATQTLPWLQWDGEQEHALHASWDSLT
AFDRAHRGRISALEPQGDILDEFLKQQRSSRHEEYPAPGREEESEPSTETDGDSDFKIPV
LPYGQHLVIDIKSTWGDRHYVGLNGIEIFSSSGEPVQISSITADPPDINILPAYGKDPRV
VSNLIDGVNRTQDDMHVWLAPFTPGMTHTISIEFTHPCQVALIRIWNYNKSRIHSFRGVK
DITMLLDTQCIFEGEIAKASGTLMGAPEHFGDTILFTTDEDILEAIFCLDDTFDMDAESL
CGLQPEEALRRPSTADGEGQDERPFTQAGLGAQDQVPGLELQSGPPVSDVFTPEPGIFYG
LCLRLNFTASWGDLHYIGLTGLEVVGKDGEALPIQPQQLSASPRDLNDLPEYSDDSRTLD
KLIDGMNITTEDEHMWLIPFSPGLDHVVMIHFDRAQSIAGLRLWNYNKSPEDTYRGVKIA
HVSLDGLCVSPAEGFLIRKGPGNCHFDFAQEILFGDYLQTRLPPAPSRRLDAKSLERASM
DYEAPLMPCGFIFQFQLLSSWGDPYYIGLTGLELYDEHGERIPLSQNNIAAFPDSVNALE
GVCGDVRTPDKLIDQVNDTSDGRHMWLAPILPGLVNRVYVIFDLPTTVSMIKLWNYTKTP
QRGVKEFGLLVDDLLVYNGILAMVSHVVGGILPTCEPTVPHHTILFAEDTDLCHQEKHTI
ISKPEEDQDIQMMNENQVITTSRRKPATADPALRPKTCIREKESSRRWRC
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcaggccctgcggaaggtggagagaagccggtcctgctctcaggagagaaag
gagggttacagtaaggacatggtgacagactttgatgagaaacatgatgagtatttaata
ttgcttcagcagagaaaccggatattaaagcatctgaaagccaaggaccccgtgcagctg
aggttggaacacttggagcaaggtttctctgtctatgtcaatggggccaattcagagctg
aagacatccccacggaaagctgtgcacacagacttctccagaagtgcctcacaggcggag
gggtcacaagattatggacgaagaaccctattccgagaagctgaagaagtcttaagatgc
agctccaggacagcaccaggaaaagtccagcgccgaggatggcaccagaaatctgtgcag
atcagaactgaagctggctctcgtctccacattgaacctcctctggactgttcagaagat
tttgaatcacatgaggatgtgattgacaagcatgaggatgccactggggaccacacacag
gagctgagaaaaggtcttggactcagcacaagcctccagactcaagaggacggctccagt
gacgagtatgactctattgaggaagacgtcctctctgagacagagaccgaggaccctgta
ttgccagtgtatgccagagatgaatgtccccttcccagccatgatgcagtgctgaaagat
gtccccaaggaccaggaactggaaggccggcctccccagaccacagacacccttgtggtg
atggagtttaacccagcttctaaaagtaataaaatggaacggattttatctgctaagcgg
aaagagaatgctgaggttttcatcctcagcaaaccagaatcagtcctgaacccacaaccc
ccggcggtgttcccagaccaggagagggcctgttccagatctggaagccggagagatagg
cccttgtcagccacccgcaaagcatgtgcagccgaggaccgagaggaggatgcctcggct
gtgctgaaagccatccaggtggagaatgcagctctgcaacaggtgctcctcagccaagat
cctgagctccaaaccagtccacagcaggatgccaaggaaccaccagtaaaatcacggccc
agtctgctgaaggccaaggaggacatccctgagccgcttgctgtcactccagtgaccact
aatcctgagctgtgcaggacagcagggggagccaaagctgtcagccaagccctggacaga
atgagccctttgggaagcagacaacagcataaacttctgggagtcttgcagactgtggaa
agtgacactacccatcccagccaggtggctataccaacagagaagccaggaccagatcca
gaggaaaagtggaaagcaagaatagatgaaattgaagatgccatctatgtgactatggaa
atcctgtctaactggggcaatgcatcatgggtgggtctcacagaagtccagttctttgac
ctgaacaacataaagctttatgtctcacctcatgatgtggacatccggaacgcagtgttg
ccaggcgagctgggctgccttgtcaacagggatttagtgagcaagaaggaccctccagtg
tggacctgccctttccaccctccacttcagctctatttcattattcacaacatgcaacag
cttcgtgacttcggtctggccacgatcaaggttcggaattattggacagcagatggggat
cttgacattggtgctaagaacgtgaaactctatgtcaacaaaagcctcctcttcgatggc
gtgctagagaaaggaggaggtgaagccccgtttgattgtaccatccctgttgatctgcag
agtgagaagaatgagaacccagagaaggccttgaggactgactggaaagaaagcaaaggc
gccctcaagatggctgccacgggtaaggataaggagcttgggctcagctgcttacagcca
gctgaatccttggatatgagtgtttcctcacaaggagatttccttggtgaaaaggtgaat
gctacatattgcccgaagaaaagtttgtccaagttacaggaagatgtaagactgttggca
acccctgcgtctatgggtgatgggcccagtgtcccttcttcctcctctcctgggaaatgt
cttcctctagaagaggagctctctttcatccaacagctggaaaacctcagaagtaggaaa
atccctgaacccactgggaaaactccccactggttacagccttctctcacaggaatgggc
aaaaaacagacagttaggaagcccaaacccctgtggctcagtcctgaaaaagatctggaa
cagaagagcaggcttccatcttatgacgttattggtgatgcttctggagaggtggaggcc
agagaaaaaggcccgaggcgtgagcaagggagaagtagcagctggaatgtcatcactgag
gagagacccccaaaggcatcctccaaagcctgtggcagtgacttagacatctttagccag
cctcctagcagggatcgccctgctagtgggaggagggccctgaagaaggacgccagcagt
agccatggtgatgaccggccagccagcaaagaagacgcccaggccacccagacactgcct
tggttgcagtgggatggtgagcaggagcatgcactgcatgcatcgtgggattccctcact
gccttcgaccgtgcccaccggggccgcatctctgccctggagccacagggggacatcctg
gatgagttcctgaagcagcagaggagcagccggcatgaggagtacccagcccctggcaga
gaggaggagtcagagccctccacagagacagatggtgacagcgattttaaaattccagtc
ctcccttatggacagcacttggtcattgacatcaagtctacatggggagatagacactat
gttggccttaatggcatagaaatattcagctcctcaggggaaccagtacagatttccagc
attacagcggaccctcctgacatcaatattttaccagcttatgggaaagacccacgtgta
gtgtctaacctcattgatggggtgaacaggacccaggatgacatgcatgtctggctggcc
cccttcacaccaggcatgacccacaccatctctattgaattcacacacccttgccaagtt
gccctgattaggatttggaattacaataagtctcgaatccactccttccgaggtgtgaaa
gacatcacaatgctgttggatactcagtgcatctttgaaggagaaattgccaaagcctca
ggaaccctgatgggagcccccgagcactttggagacactattctattcaccacggatgag
gacatcctagaggccatattctgtttggatgatacttttgacatggatgctgagagtctg
tgtggtcttcagcctgaagaggcgctaaggaggcccagcactgccgatggtgaaggtcag
gatgaaaggcccttcacacaggctggcttgggtgcccaggaccaggtaccaggactagag
ctacaatccggcccccctgtctctgatgtcttcactcctgagccaggcatcttctacggg
ctatgcctccgactaaacttcacagcctcctggggggacctgcactacataggactcact
ggcctggaagtagtaggcaaggacggcgaggccctgcccatccaaccacagcagctctct
gcctctcccagggacttaaatgacctgcccgagtacagtgatgactcacggaccctggac
aagttaatcgatggcatgaacatcaccaccgaggatgagcacatgtggctgatccccttt
tcccctgggttggaccatgtggttatgatccactttgacagagcccaaagcattgctggc
ctgcgcctctggaactacaataaatctccggaggacacctaccgaggggttaaaatcgca
catgtgtccctggatggcctgtgcgtgtctcctgcagaaggctttctcatccgaaagggg
cctggtaactgccattttgattttgcacaagaaatcctctttggggactacctacagacc
cggctaccaccagcacccagcaggaggttagatgcgaagagcctggagcgagccagcatg
gactacgaggccccactcatgccctgtggcttcattttccagttccagctgctgtccagc
tggggagatccctactacattggcctcacggggctggagctgtatgatgagcatggggag
aggatcccgttgtcccagaacaatattgctgcctttccagacagtgtgaatgcactagag
ggtgtatgtggggatgtgagaacccctgacaagcttatcgaccaagtcaacgacaccagt
gatggcaggcacatgtggttggctcccatcctgcctggcttggtgaaccgagtgtatgtc
attttcgatctgcccaccactgtgtctatgatcaaactgtggaattacacgaaaacacct
cagcgaggggtgaaggagtttggcctgctggtggatgacttgctggtgtacaatggcatt
cttgccatggtgagccacgtggttgggggcatcctacccacatgtgagcctaccgtgccc
caccacaccatcctttttgccgaggacactgacctctgtcaccaggagaaacacaccatc
atcagtaagcctgaggaagaccaggacatacaaatgatgaatgaaaaccaggtcatcacc
acctctcgcaggaagccagccactgctgacccagccttacgtcccaaaacctgcatacgt
gagaaggagagctcaaggcgttggcggtgctga
DBGET
integrated database retrieval system